C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Y box binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000006047 YBX2 9606 - 17:7288252-7294615 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000007699 YBX2-001 7288252-7294564 protein_coding
  ENST00000570627 YBX2-005 7290367-7294615 processed_transcript
  ENST00000570720 YBX2-006 7289537-7290563 retained_intron
  ENST00000571127 YBX2-004 7293075-7294556 retained_intron
  ENST00000571464 YBX2-007 7288369-7290392 protein_coding
  ENST00000571485 YBX2-003 7288263-7294589 retained_intron
  ENST00000571834 YBX2-002 7288263-7293935 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyOvaryPlacentaTestisENST00000007699ENST00000570627ENST00000570720ENST00000571485ENST00000571834
Transcript ID Bladder Colon Kidney Ovary Placenta Testis
ENST00000007699 N/A N/A 0.737±0.00 N/A N/A 739.039±502.01
ENST00000570627 N/A N/A N/A 8.396±0.00 0.249±0.00 N/A
ENST00000570720 0.437±0.00 N/A N/A N/A 0.456±0.00 268.013±0.00
ENST00000571485 N/A 1.155±0.00 N/A 1.625±1.63 N/A N/A
ENST00000571834 0.209±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003729 IEA mRNA binding
GO:0003730 IEA mRNA 3'-UTR binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005844 IEA polysome
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007283 TAS spermatogenesis
GO:0007286 IEA spermatid development
GO:0008289 IEA lipid binding
GO:0009386 TAS translational attenuation
GO:0017148 IEA negative regulation of translation
GO:0030529 IEA ribonucleoprotein complex
GO:0043021 IEA ribonucleoprotein complex binding
GO:0045182 IEA translation regulator activity
GO:0048255 IEA mRNA stabilization
GO:0048477 IEA oogenesis
GO:0048599 IEA oocyte development
GO:0051100 IEA negative regulation of binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000018554 Ybx2 Y box protein 2 protein_coding Mus_musculus

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