C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: elaC ribonuclease Z 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000006744 ELAC2 9606 - 17:12992391-13018187 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338034 ELAC2-001 12992391-13018187 protein_coding
  ENST00000395962 ELAC2-002 12992392-13018021 protein_coding
  ENST00000426905 ELAC2-012 12992560-13017999 protein_coding
  ENST00000446899 ELAC2-007 12998412-13011670 protein_coding
  ENST00000465825 ELAC2-006 12992393-13000897 retained_intron
  ENST00000476042 ELAC2-009 13000177-13003554 nonsense_mediated_decay
  ENST00000480891 ELAC2-004 12992391-13006546 retained_intron
  ENST00000484122 ELAC2-003 12992391-13017628 retained_intron
  ENST00000487229 ELAC2-014 12992393-13004108 retained_intron
  ENST00000491478 ELAC2-011 12994430-12998508 retained_intron
  ENST00000492559 ELAC2-010 12995703-13002384 retained_intron
  ENST00000578071 ELAC2-015 13011724-13017966 protein_coding
  ENST00000578104 ELAC2-018 13000225-13003786 retained_intron
  ENST00000578991 ELAC2-019 12998449-13002725 retained_intron
  ENST00000580504 ELAC2-020 13005772-13017664 protein_coding
  ENST00000581499 ELAC2-017 13011663-13017643 protein_coding
  ENST00000583371 ELAC2-016 13011693-13018065 protein_coding
  ENST00000584650 ELAC2-013 12992611-13013239 protein_coding
  ENST00000609101 ELAC2-021 13003549-13017683 protein_coding
  ENST00000609345 ELAC2-023 13003506-13017615 processed_transcript
  ENST00000609757 ELAC2-022 13011687-13017590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338034ENST00000395962ENST00000426905ENST00000480891ENST00000487229ENST00000583371ENST00000584650ENST00000609101ENST00000609345
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338034 N/A 4.837±0.00 1.764±0.00 1.427±0.00 N/A 2.694±0.04 3.856±0.98 N/A 2.145±1.58 2.152±1.29 8.521±0.00 8.805±7.20 9.944±2.34 4.141±0.38
ENST00000395962 9.087±0.00 8.173±0.00 0.535±0.00 4.601±0.00 5.896±2.56 4.589±0.00 14.153±0.00 14.284±0.00 5.222±3.89 1.766±0.00 5.473±5.05 9.535±0.00 9.236±0.57 10.441±0.00
ENST00000426905 2.322±0.00 5.346±0.00 N/A 4.310±0.00 4.005±0.00 N/A N/A 6.302±0.00 N/A N/A 3.338±0.00 3.621±0.00 2.781±0.00 N/A
ENST00000480891 N/A N/A N/A N/A N/A 1.076±0.00 0.950±0.00 N/A 0.889±0.00 N/A N/A N/A N/A N/A
ENST00000487229 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.945±0.00 N/A N/A N/A N/A
ENST00000583371 N/A N/A N/A N/A N/A N/A N/A 5.682±0.00 4.587±0.00 N/A N/A N/A N/A N/A
ENST00000584650 3.122±0.00 N/A N/A 3.661±0.00 5.500±0.00 3.608±0.00 N/A 1.485±0.00 2.566±0.00 2.674±0.00 4.586±0.00 N/A N/A 5.589±0.00
ENST00000609101 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.712±0.00 N/A N/A N/A N/A
ENST00000609345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.370±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QC CIL_0008QC_0001 VISTA 17:12429509-13031929
CIL_0008DU CIL_0008DU_0001 VISTA 17:12812330-13415142

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004519 IEA endonuclease activity
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0008033 IEA tRNA processing
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0072684 IMP mitochondrial tRNA 3'-trailer cleavage, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034060 elac2 elaC homolog 2 (E. coli) protein_coding Danio_rerio
ENSMUSG00000020549 Elac2 elaC homolog 2 (E. coli) protein_coding Mus_musculus

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