C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elaC ribonuclease Z 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338034 ELAC2-001 ENSG00000006744 9606 - 17:12992391-13018187 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000338034
Transcript ID Adrenal Bladder Brain Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000338034 4.837±0.00 1.764±0.00 1.427±0.00 2.694±0.04 3.856±0.98 2.145±1.58 2.152±1.29 8.521±0.00 8.805±7.20 9.944±2.34 4.141±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QC CIL_0008QC_0001 VISTA 17:12429509-13031929
CIL_0008DU CIL_0008DU_0001 VISTA 17:12812330-13415142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004519 IEA endonuclease activity
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0072684 IMP mitochondrial tRNA 3'-trailer cleavage, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101049 Elac2-003 protein_coding Mus_musculus 0 2132
ENSMUST00000071891 Elac2-001 protein_coding Mus_musculus 0 2128
ENSMUST00000108697 Elac2-005 protein_coding Mus_musculus 0 2124
ENSMUST00000140369 Elac2-002 processed_transcript Mus_musculus 0 2122
ENSMUST00000132308 Elac2-004 protein_coding Mus_musculus 0 558
ENSMUST00000128693 Elac2-006 processed_transcript Mus_musculus 0 263

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