C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, alpha 2/delta subunit 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000007402 CACNA2D2 9606 - 3:50362799-50504244 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000266039 CACNA2D2-002 50362802-50503597 protein_coding
  ENST00000360963 CACNA2D2-003 50362802-50504244 protein_coding
  ENST00000423994 CACNA2D2-007 50362799-50503423 protein_coding
  ENST00000424201 CACNA2D2-001 50362892-50503423 protein_coding
  ENST00000429770 CACNA2D2-008 50362802-50503428 protein_coding
  ENST00000479441 CACNA2D2-005 50364666-50503423 protein_coding
  ENST00000483620 CACNA2D2-006 50362855-50365782 retained_intron
  ENST00000487413 CACNA2D2-004 50415803-50503634 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000266039ENST00000424201ENST00000429770ENST00000479441ENST00000483620
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000266039 N/A N/A N/A N/A N/A N/A 4.341±0.00 2.821±0.00 N/A N/A
ENST00000424201 4.374±0.00 N/A N/A 0.123±0.00 4.639±0.00 0.253±0.00 5.405±2.68 N/A N/A 5.923±1.99
ENST00000429770 N/A 1.271±0.00 0.344±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000479441 N/A N/A N/A N/A N/A N/A N/A N/A 1.728±0.00 N/A
ENST00000483620 N/A N/A N/A N/A N/A N/A 7.743±0.00 N/A N/A 8.194±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0001 VISTA 3:50299047-50902727

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005886 TAS plasma membrane
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006112 TAS energy reserve metabolic process
GO:0007528 IEA neuromuscular junction development
GO:0034765 IEA regulation of ion transmembrane transport
GO:0040014 IEA regulation of multicellular organism growth
GO:0044281 TAS small molecule metabolic process
GO:0046622 IEA positive regulation of organ growth
GO:0046872 IEA metal ion binding
GO:0048747 IEA muscle fiber development
GO:0050796 TAS regulation of insulin secretion
GO:0060024 IEA rhythmic synaptic transmission
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039182 cacna2d2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 protein_coding Danio_rerio
ENSDARG00000078169 CACNA2D2 (2 of 3) calcium channel, voltage-dependent, alpha 2/delta subunit 2 protein_coding Danio_rerio
ENSDARG00000079540 CACNA2D2 (3 of 3) calcium channel, voltage-dependent, alpha 2/delta subunit 2 protein_coding Danio_rerio
ENSMUSG00000010066 Cacna2d2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 protein_coding Mus_musculus

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