C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: aminoadipate-semialdehyde synthase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000008311 AASS 9606 - 7:122075647-122144280 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358954 AASS-006 122076303-122133781 nonsense_mediated_decay
  ENST00000393376 AASS-003 122076133-122133822 protein_coding
  ENST00000417368 AASS-001 122076242-122144280 protein_coding
  ENST00000426162 AASS-007 122077836-122082872 nonsense_mediated_decay
  ENST00000431170 AASS-005 122076303-122133781 nonsense_mediated_decay
  ENST00000460376 AASS-004 122075647-122086153 retained_intron
  ENST00000473553 AASS-002 122076149-122144255 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358954ENST00000393376ENST00000417368ENST00000460376ENST00000473553
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358954 N/A N/A N/A 1.199±0.00 N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A
ENST00000393376 N/A 2.423±0.00 1.422±0.00 0.935±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417368 2.567±0.00 N/A N/A 1.490±0.00 0.841±0.00 4.287±0.00 9.733±0.00 4.931±0.00 2.586±0.00 1.828±0.00 2.593±2.11 1.257±0.10 2.471±0.00
ENST00000460376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.277±0.00 N/A N/A
ENST00000473553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.292±0.00 0.332±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R2 CIL_0003R2_0001 CGP 7:121873089-122144280
CIL_00083M CIL_00083M_0001 VISTA 7:122027474-122631024
CIL_0003QN CIL_0003QN_0001 CGP 7:122075647-122310691

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006554 NAS lysine catabolic process
GO:0016491 IEA oxidoreductase activity
GO:0019477 IEA L-lysine catabolic process
GO:0033512 IEA L-lysine catabolic process to acetyl-CoA via saccharopine
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044281 TAS small molecule metabolic process
GO:0047130 EXP saccharopine dehydrogenase (NADP+, L-lysine-forming) activity
GO:0047131 NAS saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity
GO:0051262 TAS protein tetramerization
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051816 aass aminoadipate-semialdehyde synthase protein_coding Danio_rerio
ENSMUSG00000029695 Aass aminoadipate-semialdehyde synthase protein_coding Mus_musculus

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