C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003QN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000008311-ENSG00000128610 CGP 9606 7:122075647-122310691
GeneTranscriptPositionBiotype
ENSG00000008311 (AASS)
aminoadipate-semialdehyde synthase 		ENST00000358954 (AASS-006) 122076303-122133781 nonsense_mediated_decay
ENST00000393376 (AASS-003) 122076133-122133822 protein_coding
ENST00000417368 (AASS-001) 122076242-122144280 protein_coding
ENST00000426162 (AASS-007) 122077836-122082872 nonsense_mediated_decay
ENST00000431170 (AASS-005) 122076303-122133781 nonsense_mediated_decay
ENST00000460376 (AASS-004) 122075647-122086153 retained_intron
ENST00000473553 (AASS-002) 122076149-122144255 processed_transcript
ENSG00000128610 (FEZF1)
FEZ family zinc finger 1 		ENST00000418046 (FEZF1-003) 122304331-122310691 protein_coding
ENST00000427185 (FEZF1-002) 122301969-122304499 protein_coding
ENST00000442488 (FEZF1-001) 122301394-122304505 protein_coding
ENSG00000213302 (RP11-560I19.2)
 ENST00000441577 (RP11-560I19.2-001) 122234531-122234903 processed_pseudogene
ENSG00000226636 (RP5-1049N15.2)
 ENST00000420179 (RP5-1049N15.2-001) 122159300-122162243 processed_pseudogene
ENSG00000230316 (FEZF1-AS1)
FEZF1 antisense RNA 1 		ENST00000424404 (FEZF1-AS1-003) 122306881-122308557 antisense
ENST00000428449 (FEZF1-AS1-001) 122303658-122310077 antisense
ENST00000437317 (FEZF1-AS1-002) 122304950-122305817 antisense
ENSG00000234418 (RP11-560I19.1)
 ENST00000446053 (RP11-560I19.1-001) 122216347-122218437 lincRNA
ENSG00000252003 (RNU7-154P)
RNA, U7 small nuclear 154 pseudogene 		ENST00000516194 (RNU7-154P-201) 122081720-122081781 snRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003QN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029695-ENSMUSG00000029697 CGP 10090 6:23072173-23248264
GeneTranscriptPositionBiotype
ENSMUSG00000029695 (Aass)
aminoadipate-semialdehyde synthase 		ENSMUST00000031707 (Aass-001) 23072173-23132986 protein_coding
ENSMUST00000138063 (Aass-003) 23092283-23127580 processed_transcript
ENSMUST00000149864 (Aass-002) 23092283-23127612 protein_coding
ENSMUST00000152280 (Aass-004) 23109477-23132916 processed_transcript
ENSMUSG00000029697 (Fezf1)
Fez family zinc finger 1 		ENSMUST00000031709 (Fezf1-201) 23245047-23248264 protein_coding
ENSMUSG00000094300 (Gm5989)
predicted pseudogene 5989 		ENSMUST00000096093 (Gm5989-201) 23157986-23160061 processed_pseudogene
ENSMUSG00000096702 (Gm5301)
predicted pseudogene 5301 		ENSMUST00000096092 (Gm5301-201) 23165338-23167413 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QN_0001ENSG00000008311ENST00000358954ENST00000393376ENST00000417368ENST00000426162ENST00000431170ENST00000460376ENST00000473553ENSG00000128610ENST00000418046ENST00000427185ENST00000442488ENSG00000213302ENST00000441577ENSG00000226636ENST00000420179ENSG00000230316ENST00000424404ENST00000428449ENST00000437317ENSG00000234418ENST00000446053ENSG00000252003ENST00000516194CIL_0003QN_0002ENSMUSG00000029695ENSMUST00000031707ENSMUST00000138063ENSMUST00000149864ENSMUST00000152280ENSMUSG00000029697ENSMUST00000031709ENSMUSG00000094300ENSMUST00000096093ENSMUSG00000096702ENSMUST00000096092
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QN_0001ENSG00000008311ENST00000358954ENST00000393376ENST00000417368ENST00000460376ENST00000473553ENSG00000128610ENST00000418046ENST00000427185ENST00000442488ENSG00000213302ENST00000441577ENSG00000226636ENST00000420179ENSG00000230316ENST00000424404ENST00000428449ENST00000437317ENSG00000234418ENST00000446053ENSG00000252003ENST00000516194CIL_0003QN_0002ENSMUSG00000029695ENSMUST00000031707ENSMUST00000138063ENSMUST00000149864ENSMUST00000152280ENSMUSG00000029697ENSMUST00000031709ENSMUSG00000094300ENSMUST00000096093ENSMUSG00000096702ENSMUST00000096092
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008311 ENST00000358954 N/A N/A N/A N/A 1.199±0.00 N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A
ENST00000393376 N/A N/A 2.423±0.00 1.422±0.00 0.935±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417368 2.567±0.00 N/A N/A N/A 1.490±0.00 0.841±0.00 4.287±0.00 9.733±0.00 4.931±0.00 2.586±0.00 1.828±0.00 2.593±2.11 1.257±0.10 2.471±0.00
ENST00000426162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.277±0.00 N/A N/A
ENST00000473553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.292±0.00 0.332±0.00 N/A
ENSG00000128610 ENST00000418046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.772±0.00
ENST00000427185 N/A 0.087±0.00 N/A 0.120±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442488 N/A N/A N/A 0.120±0.00 N/A N/A N/A N/A 0.031±0.00 0.030±0.00 N/A 0.031±0.00 N/A N/A
ENSG00000213302 ENST00000441577 0.079±0.00 0.042±0.00 N/A 0.044±0.00 0.042±0.00 0.079±0.00 N/A N/A 0.038±0.00 0.040±0.00 0.223±0.00 N/A N/A 0.067±0.00
ENSG00000226636 ENST00000420179 N/A N/A N/A 0.010±0.00 0.014±0.00 N/A 0.122±0.00 N/A 0.004±0.00 N/A N/A 0.016±0.01 0.008±0.00 0.240±0.00
ENSG00000230316 ENST00000424404 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.263±0.00 N/A N/A N/A N/A
ENST00000428449 N/A N/A N/A 0.043±0.00 N/A N/A 0.012±0.00 N/A N/A 0.011±0.00 N/A 0.043±0.04 N/A 0.421±0.11
ENST00000437317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A
ENSG00000234418 ENST00000446053 N/A N/A N/A 0.097±0.00 N/A N/A 0.074±0.00 N/A N/A N/A N/A 0.064±0.00 N/A 0.256±0.00
ENSG00000252003 ENST00000516194 2.560±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029695 ENSMUST00000031707 0.116±0.04 1.050±0.59 0.141±0.00 0.346±0.24 0.335±0.12 0.084±0.04 0.160±0.06 52.975±16.62 37.451±29.38 1.767±0.24 0.026±0.01 1.336±0.31 3.556±4.49 0.368±0.06
ENSMUST00000138063 N/A N/A N/A 2.225±0.00 N/A 0.249±0.10 N/A N/A N/A N/A 0.048±0.03 3.956±0.00 0.860±0.44 0.913±0.60
ENSMUST00000149864 0.168±0.00 N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A N/A 0.077±0.02 1.242±0.00 N/A 0.410±0.00
ENSMUST00000152280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A
ENSMUSG00000029697 ENSMUST00000031709 N/A N/A 0.004±0.00 2.958±2.23 N/A 0.043±0.00 0.012±0.00 0.016±0.00 0.016±0.00 0.043±0.02 N/A 0.021±0.00 0.030±0.01 0.033±0.01
ENSMUSG00000094300 ENSMUST00000096093 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A 0.002±0.00 0.074±0.08
ENSMUSG00000096702 ENSMUST00000096092 N/A N/A N/A 0.001±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00

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