C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003R2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106278-ENSG00000008311 CGP 9606 7:121873089-122144280
GeneTranscriptPositionBiotype
ENSG00000008311 (AASS)
aminoadipate-semialdehyde synthase 		ENST00000358954 (AASS-006) 122076303-122133781 nonsense_mediated_decay
ENST00000393376 (AASS-003) 122076133-122133822 protein_coding
ENST00000417368 (AASS-001) 122076242-122144280 protein_coding
ENST00000426162 (AASS-007) 122077836-122082872 nonsense_mediated_decay
ENST00000431170 (AASS-005) 122076303-122133781 nonsense_mediated_decay
ENST00000460376 (AASS-004) 122075647-122086153 retained_intron
ENST00000473553 (AASS-002) 122076149-122144255 processed_transcript
ENSG00000106278 (PTPRZ1)
protein tyrosine phosphatase, receptor-type, Z polypeptide 1 		ENST00000393386 (PTPRZ1-001) 121873089-122062036 protein_coding
ENST00000449182 (PTPRZ1-002) 121873361-122061361 protein_coding
ENST00000468641 (PTPRZ1-007) 122033858-122036632 retained_intron
ENST00000470504 (PTPRZ1-008) 122034013-122039584 retained_intron
ENST00000471837 (PTPRZ1-003) 121873161-121967023 processed_transcript
ENST00000474500 (PTPRZ1-010) 122059374-122061692 retained_intron
ENST00000483028 (PTPRZ1-004) 122011208-122013312 processed_transcript
ENST00000483995 (PTPRZ1-006) 122028434-122032080 retained_intron
ENST00000489114 (PTPRZ1-009) 122028218-122034340 retained_intron
ENSG00000252003 (RNU7-154P)
RNA, U7 small nuclear 154 pseudogene 		ENST00000516194 (RNU7-154P-201) 122081720-122081781 snRNA
CIL_0003R2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068748-ENSMUSG00000029695 CGP 10090 6:22875502-23132986
GeneTranscriptPositionBiotype
ENSMUSG00000029695 (Aass)
aminoadipate-semialdehyde synthase 		ENSMUST00000031707 (Aass-001) 23072173-23132986 protein_coding
ENSMUST00000138063 (Aass-003) 23092283-23127580 processed_transcript
ENSMUST00000149864 (Aass-002) 23092283-23127612 protein_coding
ENSMUST00000152280 (Aass-004) 23109477-23132916 processed_transcript
ENSMUSG00000068748 (Ptprz1)
protein tyrosine phosphatase, receptor type Z, polypeptide 1 		ENSMUST00000090568 (Ptprz1-201) 22875502-23052916 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003R2_0001ENSG00000008311ENST00000358954ENST00000393376ENST00000417368ENST00000426162ENST00000431170ENST00000460376ENST00000473553ENSG00000106278ENST00000393386ENST00000449182ENST00000468641ENST00000470504ENST00000471837ENST00000474500ENST00000483028ENST00000483995ENST00000489114ENSG00000252003ENST00000516194CIL_0003R2_0002ENSMUSG00000029695ENSMUST00000031707ENSMUST00000138063ENSMUST00000149864ENSMUST00000152280ENSMUSG00000068748ENSMUST00000090568
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003R2_0001ENSG00000008311ENST00000358954ENST00000393376ENST00000417368ENST00000460376ENST00000473553ENSG00000106278ENST00000393386ENST00000449182ENST00000470504ENST00000471837ENST00000474500ENSG00000252003ENST00000516194CIL_0003R2_0002ENSMUSG00000029695ENSMUST00000031707ENSMUST00000138063ENSMUST00000149864ENSMUST00000152280ENSMUSG00000068748ENSMUST00000090568
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008311 ENST00000358954 N/A N/A N/A N/A 1.199±0.00 N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A
ENST00000393376 N/A N/A 2.423±0.00 1.422±0.00 0.935±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417368 2.567±0.00 N/A N/A N/A 1.490±0.00 0.841±0.00 4.287±0.00 9.733±0.00 4.931±0.00 2.586±0.00 1.828±0.00 2.593±2.11 1.257±0.10 2.471±0.00
ENST00000426162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.277±0.00 N/A N/A
ENST00000473553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.292±0.00 0.332±0.00 N/A
ENSG00000106278 ENST00000393386 N/A 0.014±0.00 0.012±0.00 10.131±3.42 0.043±0.00 1.151±0.00 N/A N/A N/A 0.111±0.00 0.015±0.00 0.097±0.00 0.017±0.00 0.130±0.00
ENST00000449182 0.025±0.00 N/A N/A 6.158±0.00 0.626±0.58 0.568±0.25 0.047±0.03 N/A 0.565±0.00 0.753±0.03 0.060±0.05 0.242±0.13 0.041±0.02 0.193±0.00
ENST00000468641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.00 N/A
ENST00000471837 N/A N/A N/A N/A N/A N/A N/A 0.693±0.00 2.033±0.00 2.199±0.00 N/A 0.956±0.00 N/A N/A
ENST00000474500 N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A 0.117±0.02 N/A
ENST00000483028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252003 ENST00000516194 2.560±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029695 ENSMUST00000031707 0.116±0.04 1.050±0.59 0.141±0.00 0.346±0.24 0.335±0.12 0.084±0.04 0.160±0.06 52.975±16.62 37.451±29.38 1.767±0.24 0.026±0.01 1.336±0.31 3.556±4.49 0.368±0.06
ENSMUST00000138063 N/A N/A N/A 2.225±0.00 N/A 0.249±0.10 N/A N/A N/A N/A 0.048±0.03 3.956±0.00 0.860±0.44 0.913±0.60
ENSMUST00000149864 0.168±0.00 N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A N/A 0.077±0.02 1.242±0.00 N/A 0.410±0.00
ENSMUST00000152280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A
ENSMUSG00000068748 ENSMUST00000090568 0.156±0.11 0.760±0.36 2.006±0.02 21.654±13.40 0.318±0.13 1.274±0.67 0.232±0.08 0.064±0.02 0.020±0.02 0.665±0.31 0.043±0.02 1.613±1.47 0.023±0.01 0.017±0.02

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