C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synovial sarcoma translocation gene on chromosome 18-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000008324 SS18L2 9606 + 3:42581840-42595114 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000011691 SS18L2-201 42590806-42594998 protein_coding
  ENST00000447630 SS18L2-001 42581840-42595114 protein_coding
  ENST00000474941 SS18L2-002 42591274-42594660 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverLungMusclePlacentaENST00000011691
Transcript ID Colon Liver Lung Muscle Placenta
ENST00000011691 11.484±0.00 10.311±0.00 24.783±0.00 7.643±0.00 6.776±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000480 CIL_000480_0001 CGP 3:42489299-42601080
CIL_00047Z CIL_00047Z_0001 CGP 3:42547969-42601080
CIL_000488 CIL_000488_0001 CGP 3:42581840-42648741

Gene Ontology

No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039777 ss18l2 synovial sarcoma translocation gene on chromosome 18-like 2 protein_coding Danio_rerio
ENSMUSG00000032526 Deb1 differentially expressed in B16F10 1 protein_coding Mus_musculus

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