C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mediator complex subunit 24
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000008838 MED24 9606 - 17:40019097-40061215 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356271 MED24-016 40019098-40054407 protein_coding
  ENST00000394126 MED24-003 40019097-40054092 protein_coding
  ENST00000394127 MED24-002 40019108-40054405 protein_coding
  ENST00000394128 MED24-006 40019102-40054405 protein_coding
  ENST00000422942 MED24-009 40019503-40023160 protein_coding
  ENST00000428757 MED24-018 40032716-40053873 protein_coding
  ENST00000470126 MED24-008 40019632-40021414 processed_transcript
  ENST00000479829 MED24-005 40033707-40054375 processed_transcript
  ENST00000491466 MED24-010 40019145-40022442 nonsense_mediated_decay
  ENST00000492176 MED24-011 40022412-40023651 retained_intron
  ENST00000495586 MED24-012 40026306-40027149 retained_intron
  ENST00000501516 MED24-004 40019529-40053608 protein_coding
  ENST00000535071 MED24-014 40022394-40054408 protein_coding
  ENST00000535508 MED24-017 40019173-40054405 nonsense_mediated_decay
  ENST00000537674 MED24-024 40035262-40054413 protein_coding
  ENST00000543759 MED24-025 40035143-40054413 protein_coding
  ENST00000577488 MED24-030 40032673-40033675 retained_intron
  ENST00000578161 MED24-026 40035322-40054416 protein_coding
  ENST00000578901 MED24-019 40027015-40053377 nonsense_mediated_decay
  ENST00000579364 MED24-036 40019449-40020610 retained_intron
  ENST00000580008 MED24-020 40033056-40053312 nonsense_mediated_decay
  ENST00000580302 MED24-023 40053348-40054742 protein_coding
  ENST00000580517 MED24-027 40035296-40054416 protein_coding
  ENST00000580720 MED24-035 40023142-40026450 retained_intron
  ENST00000580885 MED24-013 40023289-40054408 protein_coding
  ENST00000580921 MED24-034 40026178-40027523 retained_intron
  ENST00000581054 MED24-028 40035901-40054408 retained_intron
  ENST00000581058 MED24-033 40023365-40027946 nonsense_mediated_decay
  ENST00000582023 MED24-022 40035285-40056690 protein_coding
  ENST00000584077 MED24-031 40031168-40032433 retained_intron
  ENST00000584782 MED24-032 40026303-40028059 retained_intron
  ENST00000585249 MED24-029 40032671-40033646 retained_intron
  ENST00000585306 MED24-021 40035198-40061215 protein_coding
  ENST00000614384 MED24-201 40019129-40053615 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356271ENST00000394127ENST00000394128ENST00000422942ENST00000428757ENST00000491466ENST00000492176ENST00000501516ENST00000535071ENST00000535508ENST00000577488ENST00000578901ENST00000580885
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.657±0.00 N/A N/A N/A
ENST00000394127 N/A 3.233±0.00 N/A 2.382±1.39 4.371±0.00 N/A 3.171±2.72 N/A N/A N/A 3.621±0.00 6.257±0.00 6.201±0.00 5.265±0.37
ENST00000394128 3.256±0.00 N/A N/A N/A N/A 1.430±0.00 N/A N/A 2.223±0.00 N/A 7.625±0.00 12.652±5.70 12.656±0.50 8.269±0.00
ENST00000422942 14.883±0.00 14.499±0.00 N/A N/A 14.091±0.00 N/A N/A N/A N/A 32.410±0.00 N/A 38.749±0.00 24.336±0.00 26.576±4.57
ENST00000428757 N/A N/A N/A N/A N/A 2.941±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491466 N/A N/A N/A N/A N/A 6.385±0.00 N/A N/A N/A 35.211±0.00 N/A 40.426±0.00 N/A N/A
ENST00000492176 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.140±0.00 7.951±0.00 N/A N/A N/A
ENST00000501516 N/A N/A 0.494±0.00 2.550±1.75 N/A N/A N/A N/A N/A 0.427±0.00 N/A 1.271±0.00 N/A 5.603±0.00
ENST00000535071 N/A N/A N/A 1.492±0.00 1.825±0.00 N/A N/A 1.584±0.00 N/A 0.739±0.00 2.148±0.00 7.284±3.50 7.362±0.00 12.081±0.00
ENST00000535508 5.718±0.00 6.332±0.00 0.679±0.00 7.067±0.00 3.783±3.06 2.632±0.00 4.464±3.69 11.950±0.00 2.491±0.00 6.963±0.00 10.494±0.00 N/A 3.639±0.00 7.314±0.00
ENST00000577488 N/A N/A N/A 5.276±0.00 6.043±0.00 N/A 3.749±0.00 N/A N/A 3.422±0.00 18.050±0.00 N/A N/A N/A
ENST00000578901 N/A N/A N/A N/A N/A N/A 1.446±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000580885 N/A N/A N/A N/A N/A N/A N/A N/A 0.879±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873
CIL_0002PX CIL_0002PX_0001 CGP 17:40015361-40061215
CIL_0002KL CIL_0002KL_0001 CGP 17:40019097-40093867

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001104 IDA RNA polymerase II transcription cofactor activity
GO:0003712 IDA transcription cofactor activity
GO:0003713 IEA transcription coactivator activity
GO:0004402 IEA histone acetyltransferase activity
GO:0004872 IDA receptor activity
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0006367 IDA transcription initiation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016573 IEA histone acetylation
GO:0016592 NAS mediator complex
GO:0019827 IEA stem cell maintenance
GO:0030374 NAS ligand-dependent nuclear receptor transcription coactivator activity
GO:0030518 IDA intracellular steroid hormone receptor signaling pathway
GO:0030521 IDA androgen receptor signaling pathway
GO:0042809 NAS vitamin D receptor binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046966 IDA thyroid hormone receptor binding
GO:0051291 IEA protein heterooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032459 med24 mediator complex subunit 24 protein_coding Danio_rerio
ENSMUSG00000017210 Med24 mediator complex subunit 24 protein_coding Mus_musculus

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