C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002PX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108342-ENSG00000008838 CGP 9606 17:40015361-40061215
GeneTranscriptPositionBiotype
ENSG00000008838 (MED24)
mediator complex subunit 24 		ENST00000356271 (MED24-016) 40019098-40054407 protein_coding
ENST00000394126 (MED24-003) 40019097-40054092 protein_coding
ENST00000394127 (MED24-002) 40019108-40054405 protein_coding
ENST00000394128 (MED24-006) 40019102-40054405 protein_coding
ENST00000422942 (MED24-009) 40019503-40023160 protein_coding
ENST00000428757 (MED24-018) 40032716-40053873 protein_coding
ENST00000470126 (MED24-008) 40019632-40021414 processed_transcript
ENST00000479829 (MED24-005) 40033707-40054375 processed_transcript
ENST00000491466 (MED24-010) 40019145-40022442 nonsense_mediated_decay
ENST00000492176 (MED24-011) 40022412-40023651 retained_intron
ENST00000495586 (MED24-012) 40026306-40027149 retained_intron
ENST00000501516 (MED24-004) 40019529-40053608 protein_coding
ENST00000535071 (MED24-014) 40022394-40054408 protein_coding
ENST00000535508 (MED24-017) 40019173-40054405 nonsense_mediated_decay
ENST00000537674 (MED24-024) 40035262-40054413 protein_coding
ENST00000543759 (MED24-025) 40035143-40054413 protein_coding
ENST00000577488 (MED24-030) 40032673-40033675 retained_intron
ENST00000578161 (MED24-026) 40035322-40054416 protein_coding
ENST00000578901 (MED24-019) 40027015-40053377 nonsense_mediated_decay
ENST00000579364 (MED24-036) 40019449-40020610 retained_intron
ENST00000580008 (MED24-020) 40033056-40053312 nonsense_mediated_decay
ENST00000580302 (MED24-023) 40053348-40054742 protein_coding
ENST00000580517 (MED24-027) 40035296-40054416 protein_coding
ENST00000580720 (MED24-035) 40023142-40026450 retained_intron
ENST00000580885 (MED24-013) 40023289-40054408 protein_coding
ENST00000580921 (MED24-034) 40026178-40027523 retained_intron
ENST00000581054 (MED24-028) 40035901-40054408 retained_intron
ENST00000581058 (MED24-033) 40023365-40027946 nonsense_mediated_decay
ENST00000582023 (MED24-022) 40035285-40056690 protein_coding
ENST00000584077 (MED24-031) 40031168-40032433 retained_intron
ENST00000584782 (MED24-032) 40026303-40028059 retained_intron
ENST00000585249 (MED24-029) 40032671-40033646 retained_intron
ENST00000585306 (MED24-021) 40035198-40061215 protein_coding
ENST00000614384 (MED24-201) 40019129-40053615 protein_coding
ENSG00000108342 (CSF3)
colony stimulating factor 3 (granulocyte) 		ENST00000225474 (CSF3-001) 40015444-40017813 protein_coding
ENST00000331769 (CSF3-002) 40015447-40017813 protein_coding
ENST00000394148 (CSF3-004) 40015467-40017057 protein_coding
ENST00000394149 (CSF3-003) 40015361-40017813 protein_coding
ENST00000479880 (CSF3-005) 40015447-40016943 retained_intron
ENST00000577675 (CSF3-006) 40015487-40017648 protein_coding
ENST00000579852 (CSF3-007) 40015446-40017758 nonsense_mediated_decay
ENST00000582798 (CSF3-009) 40015435-40016162 retained_intron
ENST00000583218 (CSF3-008) 40015361-40016917 protein_coding
ENSG00000126351 (THRA)
thyroid hormone receptor, alpha 		ENST00000264637 (THRA-001) 40062810-40093867 protein_coding
ENST00000394121 (THRA-003) 40062193-40093613 protein_coding
ENST00000450525 (THRA-002) 40062899-40092627 protein_coding
ENST00000546243 (THRA-006) 40068903-40089730 protein_coding
ENST00000577288 (THRA-007) 40058290-40076912 protein_coding
ENST00000577486 (THRA-010) 40072091-40077558 protein_coding
ENST00000577637 (THRA-011) 40084434-40087001 retained_intron
ENST00000578218 (THRA-009) 40062193-40083866 protein_coding
ENST00000584985 (THRA-005) 40062810-40093867 protein_coding
ENST00000585047 (THRA-008) 40061904-40077604 protein_coding
ENSG00000238793 (SNORD124)
small nucleolar RNA, C/D box 124 		ENST00000459577 (SNORD124-201) 40027542-40027645 snoRNA
CIL_0002PX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038067-ENSMUSG00000017210 CGP 10090 11:98701263-98729435
GeneTranscriptPositionBiotype
ENSMUSG00000017210 (Med24)
mediator complex subunit 24 		ENSMUST00000017354 (Med24-002) 98704591-98729435 protein_coding
ENSMUST00000100500 (Med24-010) 98704900-98729410 protein_coding
ENSMUST00000124371 (Med24-008) 98706427-98707251 retained_intron
ENSMUST00000125064 (Med24-005) 98704591-98728834 retained_intron
ENSMUST00000126565 (Med24-011) 98718551-98729374 protein_coding
ENSMUST00000137328 (Med24-001) 98708842-98729418 retained_intron
ENSMUST00000138750 (Med24-003) 98704900-98729367 nonsense_mediated_decay
ENSMUST00000139849 (Med24-007) 98707266-98708003 processed_transcript
ENSMUST00000141566 (Med24-004) 98717910-98718810 processed_transcript
ENSMUST00000144048 (Med24-012) 98718638-98729403 retained_intron
ENSMUST00000144720 (Med24-006) 98709646-98711066 retained_intron
ENSMUST00000156378 (Med24-009) 98704843-98706480 retained_intron
ENSMUSG00000038067 (Csf3)
colony stimulating factor 3 (granulocyte) 		ENSMUST00000038886 (Csf3-001) 98701263-98703629 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PX_0001ENSG00000008838ENST00000356271ENST00000394126ENST00000394127ENST00000394128ENST00000422942ENST00000428757ENST00000470126ENST00000479829ENST00000491466ENST00000492176ENST00000495586ENST00000501516ENST00000535071ENST00000535508ENST00000537674ENST00000543759ENST00000577488ENST00000578161ENST00000578901ENST00000579364ENST00000580008ENST00000580302ENST00000580517ENST00000580720ENST00000580885ENST00000580921ENST00000581054ENST00000581058ENST00000582023ENST00000584077ENST00000584782ENST00000585249ENST00000585306ENST00000614384ENSG00000108342ENST00000225474ENST00000331769ENST00000394148ENST00000394149ENST00000479880ENST00000577675ENST00000579852ENST00000582798ENST00000583218ENSG00000126351ENST00000264637ENST00000394121ENST00000450525ENST00000546243ENST00000577288ENST00000577486ENST00000577637ENST00000578218ENST00000584985ENST00000585047ENSG00000238793ENST00000459577CIL_0002PX_0002ENSMUSG00000017210ENSMUST00000017354ENSMUST00000100500ENSMUST00000124371ENSMUST00000125064ENSMUST00000126565ENSMUST00000137328ENSMUST00000138750ENSMUST00000139849ENSMUST00000141566ENSMUST00000144048ENSMUST00000144720ENSMUST00000156378ENSMUSG00000038067ENSMUST00000038886
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PX_0001ENSG00000008838ENST00000356271ENST00000394127ENST00000394128ENST00000422942ENST00000428757ENST00000491466ENST00000492176ENST00000501516ENST00000535071ENST00000535508ENST00000577488ENST00000578901ENST00000580885ENSG00000108342ENST00000225474ENST00000331769ENST00000394148ENST00000394149ENST00000479880ENST00000577675ENST00000579852ENST00000582798ENST00000583218ENSG00000126351ENST00000264637ENST00000394121ENST00000450525ENST00000546243ENST00000577486ENST00000584985ENSG00000238793ENST00000459577CIL_0002PX_0002ENSMUSG00000017210ENSMUST00000017354ENSMUST00000100500ENSMUST00000125064ENSMUSG00000038067ENSMUST00000038886
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008838 ENST00000356271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.657±0.00 N/A N/A N/A
ENST00000394126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394127 N/A 3.233±0.00 N/A 2.382±1.39 4.371±0.00 N/A 3.171±2.72 N/A N/A N/A 3.621±0.00 6.257±0.00 6.201±0.00 5.265±0.37
ENST00000394128 3.256±0.00 N/A N/A N/A N/A 1.430±0.00 N/A N/A 2.223±0.00 N/A 7.625±0.00 12.652±5.70 12.656±0.50 8.269±0.00
ENST00000422942 14.883±0.00 14.499±0.00 N/A N/A 14.091±0.00 N/A N/A N/A N/A 32.410±0.00 N/A 38.749±0.00 24.336±0.00 26.576±4.57
ENST00000428757 N/A N/A N/A N/A N/A 2.941±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491466 N/A N/A N/A N/A N/A 6.385±0.00 N/A N/A N/A 35.211±0.00 N/A 40.426±0.00 N/A N/A
ENST00000492176 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.140±0.00 7.951±0.00 N/A N/A N/A
ENST00000495586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000501516 N/A N/A 0.494±0.00 2.550±1.75 N/A N/A N/A N/A N/A 0.427±0.00 N/A 1.271±0.00 N/A 5.603±0.00
ENST00000535071 N/A N/A N/A 1.492±0.00 1.825±0.00 N/A N/A 1.584±0.00 N/A 0.739±0.00 2.148±0.00 7.284±3.50 7.362±0.00 12.081±0.00
ENST00000535508 5.718±0.00 6.332±0.00 0.679±0.00 7.067±0.00 3.783±3.06 2.632±0.00 4.464±3.69 11.950±0.00 2.491±0.00 6.963±0.00 10.494±0.00 N/A 3.639±0.00 7.314±0.00
ENST00000537674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577488 N/A N/A N/A 5.276±0.00 6.043±0.00 N/A 3.749±0.00 N/A N/A 3.422±0.00 18.050±0.00 N/A N/A N/A
ENST00000578161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578901 N/A N/A N/A N/A N/A N/A 1.446±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000579364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580885 N/A N/A N/A N/A N/A N/A N/A N/A 0.879±0.00 N/A N/A N/A N/A N/A
ENST00000580921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000108342 ENST00000225474 N/A 0.132±0.00 N/A 0.776±0.00 N/A N/A N/A N/A N/A 54.076±0.00 N/A 0.202±0.14 3.315±0.00 N/A
ENST00000331769 N/A 0.299±0.00 N/A N/A N/A 0.522±0.00 N/A N/A N/A 28.089±0.00 0.197±0.04 N/A N/A 0.450±0.00
ENST00000394148 0.077±0.00 N/A N/A N/A N/A N/A N/A 0.306±0.00 N/A 0.200±0.00 2.740±0.00 0.821±0.00 N/A N/A
ENST00000394149 N/A N/A N/A 0.832±0.76 N/A N/A N/A N/A N/A 19.553±0.00 N/A 0.641±0.00 0.736±0.27 0.151±0.01
ENST00000479880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.869±0.00 N/A N/A N/A
ENST00000577675 N/A 0.156±0.00 N/A N/A N/A N/A N/A N/A 0.544±0.00 0.150±0.00 N/A 0.295±0.00 N/A N/A
ENST00000579852 0.051±0.00 N/A N/A N/A 0.272±0.05 N/A 0.167±0.00 N/A 0.138±0.00 61.831±0.00 N/A 1.994±0.00 0.145±0.04 N/A
ENST00000582798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00
ENST00000583218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A
ENSG00000126351 ENST00000264637 9.080±0.00 4.490±0.00 1.183±0.00 32.071±26.92 10.735±0.00 27.027±0.00 N/A 6.672±0.00 1.359±0.42 N/A N/A 35.289±1.42 7.169±0.00 18.131±0.00
ENST00000394121 N/A N/A 1.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450525 9.402±0.00 3.791±0.00 1.218±0.00 7.255±3.90 12.836±0.00 15.524±0.00 5.223±4.30 3.376±3.07 1.594±0.06 3.531±3.15 8.412±7.26 7.725±5.09 5.544±0.79 5.030±2.59
ENST00000546243 N/A N/A N/A N/A N/A 1.087±0.00 1.040±0.00 2.036±0.00 N/A N/A N/A N/A N/A N/A
ENST00000577288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577486 N/A N/A N/A N/A 5.032±0.00 N/A N/A 2.159±0.00 N/A N/A N/A N/A N/A N/A
ENST00000577637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584985 N/A 4.559±0.00 N/A 27.154±0.00 5.129±3.44 8.318±5.69 5.676±4.16 16.018±0.00 N/A 9.315±0.00 N/A 4.365±0.00 5.228±0.00 12.761±1.15
ENST00000585047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000238793 ENST00000459577 0.411±0.00 0.665±0.00 N/A N/A N/A 0.198±0.00 N/A N/A N/A N/A N/A 0.472±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017210 ENSMUST00000017354 12.794±3.66 16.456±0.83 7.244±0.08 16.623±10.26 16.358±6.95 14.222±2.22 11.454±1.31 11.366±1.59 9.125±6.00 11.618±2.46 8.947±1.47 18.758±7.37 6.525±2.90 24.258±9.38
ENSMUST00000100500 N/A N/A N/A 7.512±4.31 1.773±0.00 N/A N/A N/A N/A N/A 1.969±0.00 N/A N/A N/A
ENSMUST00000124371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125064 4.017±1.24 5.950±0.73 2.606±0.53 13.747±3.79 5.504±2.07 4.782±0.91 2.217±0.16 2.020±0.40 1.919±0.98 4.691±0.71 2.038±0.20 6.520±1.20 1.739±0.68 0.500±0.00
ENSMUST00000126565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038067 ENSMUST00000038886 0.348±0.25 0.161±0.09 0.066±0.00 0.035±0.00 0.582±0.25 0.071±0.01 0.021±0.00 0.019±0.00 0.023±0.01 0.048±0.00 0.054±0.00 3.277±1.27 0.070±0.03 0.185±0.10

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