C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAN binding protein 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000010017 RANBP9 9606 - 6:13621498-13711564 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000011619 RANBP9-001 13621498-13711564 protein_coding
  ENST00000469916 RANBP9-002 13622333-13632755 processed_transcript
  ENST00000539980 RANBP9-201 13621501-13696805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000011619ENST00000539980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000011619 8.155±0.00 5.543±0.00 1.631±0.00 12.633±4.55 6.672±2.92 5.619±3.43 6.070±3.28 4.986±2.76 3.989±0.00 6.572±2.94 21.308±15.78 10.941±2.28 8.974±0.57 68.484±25.28
ENST00000539980 6.496±0.00 N/A 2.088±0.00 9.063±0.04 N/A 2.433±1.08 1.248±0.00 4.485±0.00 6.422±0.00 1.540±0.00 1.332±0.00 2.939±0.76 N/A 17.829±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MO CIL_0008MO_0001 VISTA 6:13058507-13660102
CIL_0003I9 CIL_0003I9_0001 CGP 6:13574529-13632739
CIL_0003IG CIL_0003IG_0001 CGP 6:13615327-13711564
CIL_0003IF CIL_0003IF_0001 CGP 6:13621498-13814568

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005875 TAS microtubule associated complex
GO:0006461 TAS protein complex assembly
GO:0007020 NAS microtubule nucleation
GO:0007411 TAS axon guidance
GO:0008536 TAS Ran GTPase binding
GO:0019899 IPI enzyme binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061048 ranbp9 RAN binding protein 9 protein_coding Danio_rerio
ENSMUSG00000038546 Ranbp9 RAN binding protein 9 protein_coding Mus_musculus

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