C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAN binding protein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539980 RANBP9-201 ENSG00000010017 9606 - 6:13621501-13696805 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryTestisENST00000539980
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000539980 6.496±0.00 2.088±0.00 9.063±0.04 2.433±1.08 1.248±0.00 4.485±0.00 6.422±0.00 1.540±0.00 1.332±0.00 2.939±0.76 17.829±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MO CIL_0008MO_0001 VISTA 6:13058507-13660102
CIL_0003I9 CIL_0003I9_0001 CGP 6:13574529-13632739
CIL_0003IG CIL_0003IG_0001 CGP 6:13615327-13711564
CIL_0003IF CIL_0003IF_0001 CGP 6:13621498-13814568

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005875 TAS microtubule associated complex
GO:0006461 TAS protein complex assembly
GO:0007020 NAS microtubule nucleation
GO:0007411 TAS axon guidance
GO:0008536 TAS Ran GTPase binding
GO:0019899 IPI enzyme binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144326 Ranbp9-201 protein_coding Mus_musculus 0 3506
ENSMUST00000071926 Nol7-201 protein_coding Mus_musculus 0 222

Loading