C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mannose receptor, C type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000011028 MRC2 9606 + 17:62627401-62693597 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303375 MRC2-001 62627401-62693597 protein_coding
  ENST00000446119 MRC2-004 62681458-62693595 protein_coding
  ENST00000579432 MRC2-005 62681453-62682323 protein_coding
  ENST00000580916 MRC2-007 62688858-62689933 processed_transcript
  ENST00000583597 MRC2-003 62680631-62693553 retained_intron
  ENST00000584265 MRC2-002 62627685-62676604 retained_intron
  ENST00000584682 MRC2-006 62676394-62680194 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303375ENST00000583597ENST00000584265
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303375 4.034±0.00 2.149±0.00 0.661±0.00 0.617±0.15 8.785±6.89 3.775±1.88 2.780±1.38 3.728±3.23 3.435±2.95 18.051±13.21 1.898±0.00 23.003±18.48 11.035±5.45 9.194±6.01
ENST00000583597 6.282±0.00 4.963±0.00 0.620±0.00 1.662±0.00 33.916±0.00 11.583±0.00 3.812±0.00 7.887±0.00 0.862±0.00 40.098±0.00 1.492±0.00 24.604±15.85 8.885±2.95 15.562±0.55
ENST00000584265 N/A N/A 1.609±0.00 N/A 5.446±0.00 4.025±0.00 2.299±0.00 1.119±0.00 8.390±0.00 5.859±0.00 3.876±0.00 4.783±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000563 CIL_000563_0002 CGP 17:62458658-62693597
CIL_000700 CIL_000700_0001 CGP 17:62627401-62808344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0005515 IPI protein binding
GO:0005518 IDA collagen binding
GO:0005925 IDA focal adhesion
GO:0006897 IEA endocytosis
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0030574 IDA collagen catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078135 MRC2 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000020695 Mrc2 mannose receptor, C type 2 protein_coding Mus_musculus

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