C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000700_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000011028-ENSG00000173838 CGP 9606 17:62627401-62808344
GeneTranscriptPositionBiotype
ENSG00000011028 (MRC2)
mannose receptor, C type 2 		ENST00000303375 (MRC2-001) 62627401-62693597 protein_coding
ENST00000446119 (MRC2-004) 62681458-62693595 protein_coding
ENST00000579432 (MRC2-005) 62681453-62682323 protein_coding
ENST00000580916 (MRC2-007) 62688858-62689933 processed_transcript
ENST00000583597 (MRC2-003) 62680631-62693553 retained_intron
ENST00000584265 (MRC2-002) 62627685-62676604 retained_intron
ENST00000584682 (MRC2-006) 62676394-62680194 nonsense_mediated_decay
ENSG00000173838 (MARCH10)
membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase 		ENST00000311269 (MARCH10-001) 62701315-62808334 protein_coding
ENST00000456609 (MARCH10-004) 62701314-62806653 protein_coding
ENST00000544856 (MARCH10-003) 62704948-62808290 protein_coding
ENST00000578346 (MARCH10-007) 62780940-62808325 processed_transcript
ENST00000579620 (MARCH10-010) 62701314-62736517 processed_transcript
ENST00000580520 (MARCH10-005) 62701314-62744514 protein_coding
ENST00000582358 (MARCH10-009) 62701314-62703432 processed_transcript
ENST00000582568 (MARCH10-008) 62749976-62759991 protein_coding
ENST00000583600 (MARCH10-002) 62701315-62808344 protein_coding
ENST00000583803 (MARCH10-006) 62788507-62806640 protein_coding
ENSG00000199697 (RNU6-446P)
RNA, U6 small nuclear 446, pseudogene 		ENST00000362827 (RNU6-446P-201) 62683905-62684010 snRNA
ENSG00000265702 (RP11-156L14.1)
 ENST00000577270 (RP11-156L14.1-002) 62706234-62737915 antisense
ENST00000579201 (RP11-156L14.1-003) 62706333-62736534 antisense
ENST00000582564 (RP11-156L14.1-001) 62706206-62737922 antisense
ENST00000584597 (RP11-156L14.1-004) 62699244-62736107 antisense
ENSG00000274565 (CTD-3035K23.7)
 ENST00000611274 (CTD-3035K23.7-001) 62626437-62627590 antisense
ENSG00000279713 (CTD-3035K23.3)
 ENST00000623346 (CTD-3035K23.3-001) 62679403-62681354 TEC
CIL_000700_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020695-ENSMUSG00000078627 CGP 10090 11:105292643-105456735
GeneTranscriptPositionBiotype
ENSMUSG00000020695 (Mrc2)
mannose receptor, C type 2 		ENSMUST00000021038 (Mrc2-003) 105292668-105343871 protein_coding
ENSMUST00000100335 (Mrc2-001) 105292646-105351139 protein_coding
ENSMUST00000126931 (Mrc2-002) 105292643-105326891 processed_transcript
ENSMUST00000142905 (Mrc2-004) 105329052-105332299 processed_transcript
ENSMUST00000151135 (Mrc2-005) 105340832-105343144 retained_intron
ENSMUSG00000078627 (March10)
membrane-associated ring finger (C3HC4) 10 		ENSMUST00000049995 (March10-201) 105360798-105456735 protein_coding
ENSMUST00000100332 (March10-001) 105401652-105456735 protein_coding
ENSMUST00000130685 (March10-004) 105364091-105371900 processed_transcript
ENSMUST00000138977 (March10-002) 105360798-105455294 protein_coding
ENSMUST00000151305 (March10-003) 105396695-105408707 protein_coding
ENSMUSG00000086089 (Gm11640)
predicted gene 11640 		ENSMUST00000155987 (Gm11640-001) 105434445-105435412 antisense
ENSMUSG00000086487 (Gm11638)
predicted gene 11638 		ENSMUST00000153672 (Gm11638-001) 105363252-105390642 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000700_0001ENSG00000011028ENST00000303375ENST00000446119ENST00000579432ENST00000580916ENST00000583597ENST00000584265ENST00000584682ENSG00000173838ENST00000311269ENST00000456609ENST00000544856ENST00000578346ENST00000579620ENST00000580520ENST00000582358ENST00000582568ENST00000583600ENST00000583803ENSG00000199697ENST00000362827ENSG00000265702ENST00000577270ENST00000579201ENST00000582564ENST00000584597ENSG00000274565ENST00000611274ENSG00000279713ENST00000623346CIL_000700_0002ENSMUSG00000020695ENSMUST00000021038ENSMUST00000100335ENSMUST00000126931ENSMUST00000142905ENSMUST00000151135ENSMUSG00000078627ENSMUST00000049995ENSMUST00000100332ENSMUST00000130685ENSMUST00000138977ENSMUST00000151305ENSMUSG00000086089ENSMUST00000155987ENSMUSG00000086487ENSMUST00000153672
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000700_0001ENSG00000011028ENST00000303375ENST00000583597ENST00000584265ENSG00000173838ENST00000311269ENST00000456609ENST00000544856ENST00000578346ENST00000579620ENST00000580520ENST00000582358ENST00000582568ENST00000583600ENST00000583803ENSG00000199697ENST00000362827ENSG00000265702ENST00000577270ENST00000582564ENST00000584597ENSG00000274565ENST00000611274ENSG00000279713ENST00000623346CIL_000700_0002ENSMUSG00000020695ENSMUST00000021038ENSMUST00000100335ENSMUST00000126931ENSMUSG00000078627ENSMUST00000049995ENSMUST00000100332ENSMUST00000130685ENSMUST00000138977ENSMUST00000151305ENSMUSG00000086089ENSMUST00000155987ENSMUSG00000086487ENSMUST00000153672
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000011028 ENST00000303375 4.034±0.00 2.149±0.00 0.661±0.00 0.617±0.15 8.785±6.89 3.775±1.88 2.780±1.38 3.728±3.23 3.435±2.95 18.051±13.21 1.898±0.00 23.003±18.48 11.035±5.45 9.194±6.01
ENST00000446119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583597 6.282±0.00 4.963±0.00 0.620±0.00 1.662±0.00 33.916±0.00 11.583±0.00 3.812±0.00 7.887±0.00 0.862±0.00 40.098±0.00 1.492±0.00 24.604±15.85 8.885±2.95 15.562±0.55
ENST00000584265 N/A N/A 1.609±0.00 N/A 5.446±0.00 4.025±0.00 2.299±0.00 1.119±0.00 8.390±0.00 5.859±0.00 3.876±0.00 4.783±0.00 N/A N/A
ENST00000584682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173838 ENST00000311269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.466±0.00 N/A N/A
ENST00000456609 N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.430±0.00
ENST00000544856 N/A 0.027±0.00 0.023±0.00 0.074±0.00 N/A N/A N/A 0.236±0.00 N/A 0.325±0.00 N/A 0.208±0.18 0.024±0.00 10.744±0.00
ENST00000578346 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.575±0.00 N/A 0.123±0.00 N/A N/A
ENST00000579620 0.233±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580520 N/A N/A N/A 0.098±0.00 0.013±0.00 0.416±0.00 0.006±0.00 N/A N/A 0.677±0.00 N/A 0.012±0.00 0.035±0.00 N/A
ENST00000582358 N/A N/A N/A N/A N/A N/A N/A 0.962±0.00 N/A N/A N/A N/A N/A N/A
ENST00000582568 0.147±0.00 N/A N/A 0.266±0.04 N/A 1.641±0.00 N/A N/A N/A 1.970±0.00 N/A N/A 0.245±0.14 34.657±0.00
ENST00000583600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 12.748±4.27
ENST00000583803 N/A N/A N/A 0.282±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199697 ENST00000362827 N/A 0.198±0.00 N/A N/A N/A N/A N/A N/A N/A 1.663±0.00 N/A 15.155±0.00 N/A N/A
ENSG00000265702 ENST00000577270 N/A N/A N/A 0.021±0.00 N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A
ENST00000579201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582564 N/A N/A 0.102±0.00 0.067±0.00 0.019±0.00 0.130±0.00 N/A N/A 0.006±0.00 N/A N/A 0.023±0.01 0.075±0.00 N/A
ENST00000584597 0.140±0.00 0.245±0.00 N/A N/A 0.135±0.00 N/A 0.051±0.00 N/A 0.024±0.00 N/A 0.024±0.00 N/A N/A N/A
ENSG00000274565 ENST00000611274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.933±0.00
ENSG00000279713 ENST00000623346 N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020695 ENSMUST00000021038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.152±0.00
ENSMUST00000100335 21.058±12.51 7.274±0.18 12.893±0.90 3.843±2.51 13.275±4.73 6.002±0.34 4.684±0.22 9.934±0.84 0.525±0.31 35.522±0.73 1.072±0.65 21.181±8.55 2.824±1.15 0.283±0.16
ENSMUST00000126931 N/A 6.786±1.67 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078627 ENSMUST00000049995 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A 0.066±0.00 N/A 39.787±11.05
ENSMUST00000100332 0.023±0.00 N/A N/A 0.659±0.00 0.055±0.01 N/A 0.073±0.04 N/A N/A 0.017±0.00 N/A 0.227±0.14 0.247±0.00 105.693±29.87
ENSMUST00000130685 0.204±0.00 N/A N/A N/A 0.244±0.00 N/A N/A N/A 0.017±0.00 0.158±0.00 N/A 0.461±0.00 N/A N/A
ENSMUST00000138977 0.010±0.00 N/A 0.012±0.00 0.374±0.00 0.028±0.01 N/A 0.023±0.00 0.964±0.20 N/A 0.040±0.00 N/A 0.081±0.02 0.130±0.04 33.744±12.24
ENSMUST00000151305 N/A N/A N/A N/A 0.053±0.00 N/A 0.037±0.00 N/A N/A 0.052±0.00 N/A 0.223±0.06 N/A N/A
ENSMUSG00000086089 ENSMUST00000155987 N/A N/A 0.026±0.00 0.176±0.13 N/A N/A N/A N/A N/A N/A N/A 0.603±0.30 N/A 0.762±0.00
ENSMUSG00000086487 ENSMUST00000153672 0.040±0.00 0.097±0.04 0.043±0.02 0.724±0.00 0.097±0.05 0.047±0.00 0.033±0.01 N/A 0.015±0.01 0.103±0.07 N/A 0.342±0.21 0.161±0.17 56.046±5.59

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