C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: YY1 associated factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000015153 YAF2 9606 - 12:42157104-42238349 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327791 YAF2-004 42157104-42238236 protein_coding
  ENST00000380790 YAF2-002 42159902-42238287 protein_coding
  ENST00000534854 YAF2-001 42159124-42238248 protein_coding
  ENST00000541702 YAF2-008 42231224-42238248 processed_transcript
  ENST00000546726 YAF2-015 42161671-42238180 nonsense_mediated_decay
  ENST00000546782 YAF2-009 42235642-42237783 retained_intron
  ENST00000546972 YAF2-014 42161671-42199544 retained_intron
  ENST00000547254 YAF2-005 42161749-42238349 nonsense_mediated_decay
  ENST00000547351 YAF2-016 42160608-42238221 nonsense_mediated_decay
  ENST00000547622 YAF2-017 42160496-42237512 processed_transcript
  ENST00000547724 YAF2-011 42161672-42237800 processed_transcript
  ENST00000548661 YAF2-006 42161653-42238303 nonsense_mediated_decay
  ENST00000548917 YAF2-010 42161699-42237800 protein_coding
  ENST00000550315 YAF2-018 42160042-42161628 retained_intron
  ENST00000551268 YAF2-007 42161613-42238263 nonsense_mediated_decay
  ENST00000551528 YAF2-013 42161628-42210836 retained_intron
  ENST00000552109 YAF2-003 42160266-42238248 nonsense_mediated_decay
  ENST00000552928 YAF2-012 42161690-42238223 nonsense_mediated_decay
  ENST00000555248 YAF2-201 42231224-42238349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327791ENST00000380790ENST00000534854ENST00000541702ENST00000547622ENST00000550315ENST00000552109ENST00000552928
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327791 N/A 0.691±0.00 N/A 1.556±0.07 0.832±0.00 0.805±0.04 0.523±0.00 1.150±0.00 0.286±0.04 0.986±0.00 N/A 0.866±0.22 0.713±0.00 0.889±0.03
ENST00000380790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.696±0.00 N/A
ENST00000534854 2.693±0.00 2.362±0.00 0.815±0.00 2.868±0.03 2.161±0.35 1.209±0.00 5.391±3.54 2.237±1.35 1.941±0.23 1.650±0.78 2.341±0.00 1.476±0.51 1.637±0.26 2.845±0.38
ENST00000541702 N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A 0.465±0.00 N/A N/A N/A N/A N/A
ENST00000547622 N/A 5.625±0.00 1.188±0.00 4.899±2.28 N/A 4.755±0.00 8.757±5.30 N/A 2.395±0.10 7.016±0.00 N/A 7.940±0.00 7.409±0.00 7.802±0.00
ENST00000550315 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.477±0.00 N/A N/A N/A N/A
ENST00000552109 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.480±0.00 N/A N/A N/A N/A
ENST00000552928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.819±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R1 CIL_0006R1_0001 CGP 12:42081845-42238349

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0003714 IDA transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015966 yaf2 YY1 associated factor 2 protein_coding Danio_rerio
ENSMUSG00000022634 Yaf2 YY1 associated factor 2 protein_coding Mus_musculus

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