C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: YY1 associated factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534854 YAF2-001 ENSG00000015153 9606 - 12:42159124-42238248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000534854
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000534854 2.693±0.00 2.362±0.00 0.815±0.00 2.868±0.03 2.161±0.35 1.209±0.00 5.391±3.54 2.237±1.35 1.941±0.23 1.650±0.78 2.341±0.00 1.476±0.51 1.637±0.26 2.845±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R1 CIL_0006R1_0001 CGP 12:42081845-42238349

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080299 Yaf2-001 protein_coding Mus_musculus 0 1391
ENSMUST00000133736 Yaf2-002 processed_transcript Mus_musculus 0 1142

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