C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, MYND-type containing 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000015171 ZMYND11 9606 + 10:134465-254637 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309776 ZMYND11-201 134484-254626 protein_coding
  ENST00000381584 ZMYND11-001 179994-253256 protein_coding
  ENST00000381591 ZMYND11-003 135069-254637 protein_coding
  ENST00000381604 ZMYND11-202 134465-254626 protein_coding
  ENST00000381607 ZMYND11-203 135484-254626 protein_coding
  ENST00000397955 ZMYND11-008 179994-237663 protein_coding
  ENST00000397959 ZMYND11-204 134484-254626 protein_coding
  ENST00000397962 ZMYND11-205 134465-254626 protein_coding
  ENST00000402736 ZMYND11-005 135509-254634 protein_coding
  ENST00000403354 ZMYND11-004 135484-252470 protein_coding
  ENST00000439456 ZMYND11-009 134465-237651 protein_coding
  ENST00000473115 ZMYND11-006 244471-248531 processed_transcript
  ENST00000488275 ZMYND11-007 239962-246999 retained_intron
  ENST00000509513 ZMYND11-002 134703-249261 protein_coding
  ENST00000558098 ZMYND11-010 180013-249261 protein_coding
  ENST00000602682 ZMYND11-011 179990-252580 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309776ENST00000381584ENST00000381591ENST00000381607ENST00000402736ENST00000403354ENST00000509513ENST00000558098ENST00000602682
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.534±0.00 N/A N/A N/A
ENST00000381584 N/A N/A 1.951±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381591 N/A 2.889±0.00 5.386±0.00 9.337±1.99 6.692±2.01 3.930±0.00 4.583±2.64 7.166±4.12 7.955±4.63 5.045±1.38 0.891±0.00 5.766±5.22 3.879±0.45 9.891±5.52
ENST00000381607 5.471±0.00 9.813±0.00 N/A 8.832±3.87 8.122±0.00 8.078±0.00 4.576±3.19 6.217±3.65 3.950±2.29 4.000±1.69 4.953±3.89 5.316±0.58 2.956±0.19 5.527±0.00
ENST00000402736 N/A N/A N/A 3.018±0.00 N/A 1.871±0.00 0.837±0.00 N/A 1.017±0.00 1.731±0.00 5.946±0.00 N/A N/A N/A
ENST00000403354 N/A N/A N/A N/A 2.364±0.00 N/A N/A N/A N/A N/A N/A 4.936±2.42 8.080±0.00 8.045±0.00
ENST00000509513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.268±0.00 N/A N/A N/A
ENST00000558098 N/A N/A N/A N/A N/A N/A 1.213±0.00 N/A N/A N/A N/A 6.355±0.00 3.048±0.00 10.941±0.00
ENST00000602682 N/A N/A N/A 15.512±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003714 ISS transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome
GO:0006351 IEA transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0008270 IEA zinc ion binding
GO:0008283 TAS cell proliferation
GO:0016032 IEA viral process
GO:0016568 IEA chromatin modification
GO:0034243 ISS regulation of transcription elongation from RNA polymerase II promoter
GO:0035064 ISS methylated histone binding
GO:0042393 IEA histone binding
GO:0043124 IMP negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046329 IMP negative regulation of JNK cascade
GO:2001237 IMP negative regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057249 zmynd11 zinc finger, MYND domain containing 11 protein_coding Danio_rerio
ENSMUSG00000021156 Zmynd11 zinc finger, MYND domain containing 11 protein_coding Mus_musculus

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