C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000018699 TTC27 9606 + 2:32628032-32821051 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317907 TTC27-001 32628062-32821051 protein_coding
  ENST00000428527 TTC27-004 32777882-32812615 nonsense_mediated_decay
  ENST00000433416 TTC27-003 32736785-32787149 nonsense_mediated_decay
  ENST00000438654 TTC27-005 32678878-32704998 protein_coding
  ENST00000448773 TTC27-006 32628032-32640368 protein_coding
  ENST00000454690 TTC27-002 32628156-32733921 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317907ENST00000428527ENST00000433416ENST00000438654ENST00000448773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317907 1.785±0.00 1.318±0.00 N/A 1.409±0.00 1.828±0.29 2.062±0.00 1.800±0.00 1.068±0.38 1.380±0.40 1.183±0.79 1.758±1.50 3.065±0.40 2.884±0.49 7.276±1.27
ENST00000428527 N/A N/A N/A 0.738±0.00 N/A N/A N/A N/A N/A N/A N/A 3.814±0.00 5.841±0.00 8.110±0.00
ENST00000433416 N/A N/A N/A N/A N/A 2.301±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438654 N/A N/A 4.327±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448773 N/A N/A 1.576±0.00 N/A N/A N/A N/A N/A N/A N/A 3.297±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TD CIL_0003TD_0002 CGP 2:32357028-32821051
CIL_0003TE CIL_0003TE_0002 CGP 2:32628032-33399509

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007918 ttc27 tetratricopeptide repeat domain 27 protein_coding Danio_rerio
ENSMUSG00000024078 Ttc27 tetratricopeptide repeat domain 27 protein_coding Mus_musculus

Loading