C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003TD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074166-ENSDARG00000007918 CGP 7955 17:22417371-22777132
GeneTranscriptPositionBiotype
ENSDARG00000074166 (birc6)
baculoviral IAP repeat-containing 6 		ENSDART00000114100 (birc6-201) 22417559-22570865 protein_coding
ENSDART00000157328 (birc6-001) 22417371-22571744 protein_coding
ENSDARG00000097706 (si:dkey-11a7.3)
si:dkey-11a7.3 		ENSDART00000154316 (si:dkey-11a7.3-001) 22517185-22519655 antisense
ENSDART00000155489 (si:dkey-11a7.3-002) 22517783-22519647 antisense

Danio rerio Ensembl (Zv9)

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CIL_0003TD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115760-ENSG00000018699 CGP 9606 2:32357028-32821051
GeneTranscriptPositionBiotype
ENSG00000018699 (TTC27)
tetratricopeptide repeat domain 27 		ENST00000317907 (TTC27-001) 32628062-32821051 protein_coding
ENST00000428527 (TTC27-004) 32777882-32812615 nonsense_mediated_decay
ENST00000433416 (TTC27-003) 32736785-32787149 nonsense_mediated_decay
ENST00000438654 (TTC27-005) 32678878-32704998 protein_coding
ENST00000448773 (TTC27-006) 32628032-32640368 protein_coding
ENST00000454690 (TTC27-002) 32628156-32733921 nonsense_mediated_decay
ENSG00000115760 (BIRC6)
baculoviral IAP repeat containing 6 		ENST00000421745 (BIRC6-001) 32357028-32618899 protein_coding
ENST00000431454 (BIRC6-004) 32436075-32442380 nonsense_mediated_decay
ENST00000444173 (BIRC6-003) 32433648-32441435 protein_coding
ENST00000461788 (BIRC6-008) 32515741-32519219 retained_intron
ENST00000462504 (BIRC6-006) 32472992-32476281 retained_intron
ENST00000465130 (BIRC6-010) 32602497-32611581 retained_intron
ENST00000466527 (BIRC6-011) 32388811-32401419 retained_intron
ENST00000470250 (BIRC6-009) 32575291-32594310 retained_intron
ENST00000471232 (BIRC6-002) 32524758-32618876 retained_intron
ENST00000483194 (BIRC6-005) 32443426-32449185 retained_intron
ENST00000496555 (BIRC6-007) 32509679-32513089 retained_intron
ENST00000497023 (BIRC6-012) 32502860-32505355 retained_intron
ENSG00000207653 (MIR558)
microRNA 558 		ENST00000384920 (MIR558-201) 32532153-32532246 miRNA
ENSG00000274159 (AL133243.3)
 ENST00000614487 (AL133243.3-001) 32548675-32549040 sense_intronic
ENSG00000276334 (AL133243.1)
 ENST00000610331 (AL133243.1-001) 32521927-32523547 sense_intronic
ENSG00000276517 (AL133243.2)
 ENST00000617415 (AL133243.2-001) 32526504-32529507 sense_intronic
ENSG00000279544 (AL133243.4)
 ENST00000623116 (AL133243.4-001) 32563328-32566436 TEC
ENSG00000279897 (BIRC6-AS2)
BIRC6 antisense RNA 2 		ENST00000623382 (BIRC6-AS2-001) 32557520-32574818 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0003TD_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024073-ENSMUSG00000024078 CGP 10090 17:74528295-74863570
GeneTranscriptPositionBiotype
ENSMUSG00000024078 (Ttc27)
tetratricopeptide repeat domain 27 		ENSMUST00000024882 (Ttc27-201) 74717750-74863570 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003TD_0001ENSDARG00000074166ENSDART00000114100ENSDART00000157328ENSDARG00000097706ENSDART00000154316ENSDART00000155489CIL_0003TD_0002ENSG00000018699ENST00000317907ENST00000428527ENST00000433416ENST00000438654ENST00000448773ENST00000454690ENSG00000115760ENST00000421745ENST00000431454ENST00000444173ENST00000461788ENST00000462504ENST00000465130ENST00000466527ENST00000470250ENST00000471232ENST00000483194ENST00000496555ENST00000497023ENSG00000207653ENST00000384920ENSG00000274159ENST00000614487ENSG00000276334ENST00000610331ENSG00000276517ENST00000617415ENSG00000279544ENST00000623116ENSG00000279897ENST00000623382CIL_0003TD_0003ENSMUSG00000024078ENSMUST00000024882
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003TD_0001ENSDARG00000074166ENSDART00000114100ENSDART00000157328ENSDARG00000097706ENSDART00000154316ENSDART00000155489CIL_0003TD_0002ENSG00000018699ENST00000317907ENST00000428527ENST00000433416ENST00000438654ENST00000448773ENSG00000115760ENST00000421745ENST00000471232ENSG00000207653ENST00000384920ENSG00000274159ENST00000614487ENSG00000276334ENST00000610331ENSG00000276517ENST00000617415ENSG00000279544ENST00000623116ENSG00000279897ENST00000623382CIL_0003TD_0003ENSMUSG00000024078ENSMUST00000024882
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000074166 ENSDART00000114100 N/A N/A N/A N/A N/A N/A N/A N/A 0.325±0.00 N/A N/A N/A N/A N/A
ENSDART00000157328 N/A N/A N/A 3.117±0.31 N/A N/A 2.467±0.00 1.879±0.00 1.345±0.00 N/A 0.803±0.00 N/A N/A N/A
ENSDARG00000097706 ENSDART00000154316 N/A N/A N/A 6.243±0.82 N/A N/A 0.039±0.00 0.337±0.00 N/A N/A 0.521±0.00 N/A N/A N/A
ENSDART00000155489 N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000018699 ENST00000317907 1.785±0.00 1.318±0.00 N/A 1.409±0.00 1.828±0.29 2.062±0.00 1.800±0.00 1.068±0.38 1.380±0.40 1.183±0.79 1.758±1.50 3.065±0.40 2.884±0.49 7.276±1.27
ENST00000428527 N/A N/A N/A 0.738±0.00 N/A N/A N/A N/A N/A N/A N/A 3.814±0.00 5.841±0.00 8.110±0.00
ENST00000433416 N/A N/A N/A N/A N/A 2.301±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438654 N/A N/A 4.327±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448773 N/A N/A 1.576±0.00 N/A N/A N/A N/A N/A N/A N/A 3.297±0.00 N/A N/A N/A
ENST00000454690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000115760 ENST00000421745 2.488±0.00 2.005±0.00 1.831±0.00 3.713±0.70 4.541±3.24 2.657±1.19 1.584±0.00 3.950±1.95 0.824±0.00 1.609±0.40 1.950±0.17 3.938±4.37 1.260±0.14 1.397±0.14
ENST00000431454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471232 4.002±0.00 6.542±0.00 N/A 2.767±0.00 3.054±0.00 N/A 2.574±0.00 6.981±0.00 3.951±0.00 4.683±0.00 N/A 5.359±0.40 2.348±0.25 4.502±0.62
ENST00000483194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207653 ENST00000384920 0.837±0.00 1.431±0.00 N/A 0.610±0.00 1.698±0.00 1.435±0.00 N/A N/A N/A N/A N/A N/A N/A 1.319±0.00
ENSG00000274159 ENST00000614487 0.067±0.00 0.033±0.00 N/A 0.033±0.00 0.093±0.00 N/A 0.032±0.00 0.193±0.00 0.117±0.00 0.057±0.00 0.968±0.00 0.264±0.19 N/A 0.030±0.00
ENSG00000276334 ENST00000610331 0.248±0.00 0.266±0.00 1.776±0.00 0.836±0.10 1.007±0.68 1.327±1.15 0.281±0.04 0.914±0.54 1.922±1.77 1.315±1.09 0.104±0.07 1.050±0.95 0.279±0.13 0.565±0.23
ENSG00000276517 ENST00000617415 0.380±0.00 1.374±0.00 0.622±0.00 0.594±0.01 1.207±0.83 0.713±0.67 0.201±0.04 0.282±0.12 0.927±0.87 0.629±0.27 0.125±0.04 0.667±0.49 0.149±0.01 0.435±0.23
ENSG00000279544 ENST00000623116 0.072±0.00 0.434±0.00 0.883±0.00 0.198±0.07 0.818±0.73 0.516±0.43 0.217±0.13 0.445±0.36 0.486±0.46 0.570±0.46 0.200±0.17 0.199±0.28 0.014±0.00 0.096±0.01
ENSG00000279897 ENST00000623382 N/A 0.472±0.00 0.177±0.00 0.443±0.00 0.076±0.00 0.018±0.00 0.039±0.00 0.133±0.00 0.313±0.23 0.902±0.80 0.152±0.00 0.140±0.08 0.035±0.00 0.857±0.56
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024078 ENSMUST00000024882 3.148±1.02 1.911±0.48 3.777±0.55 3.852±0.58 1.778±0.66 1.252±0.26 1.560±0.51 2.201±0.15 3.773±2.35 1.629±0.26 2.496±0.29 4.022±1.71 4.366±1.95 4.481±0.82

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