C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: differentially expressed in FDCP 6 homolog (mouse)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000023892 DEF6 9606 + 6:35297852-35321771 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316637 DEF6-001 35297852-35321771 protein_coding
  ENST00000444278 DEF6-002 35309738-35312538 protein_coding
  ENST00000468102 DEF6-003 35317608-35318230 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000316637ENST00000444278
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000316637 0.903±0.00 11.912±0.00 0.167±0.00 0.374±0.13 1.539±0.12 0.924±0.71 0.569±0.00 0.390±0.18 1.091±0.55 4.247±2.22 1.871±1.28 7.681±0.71
ENST00000444278 N/A N/A 0.444±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0001 VISTA 6:35189352-35792826
CIL_0002ER CIL_0002ER_0001 CGP 6:35258909-35321771
CIL_0004LU CIL_0004LU_0002 CGP 6:35297852-35428191

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005911 IEA cell-cell junction
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012247 def6a differentially expressed in FDCP 6a homolog (mouse) protein_coding Danio_rerio
ENSDARG00000044524 def6b differentially expressed in FDCP 6b homolog (mouse) protein_coding Danio_rerio
ENSMUSG00000002257 Def6 differentially expressed in FDCP 6 protein_coding Mus_musculus

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