C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: differentially expressed in FDCP 6 homolog (mouse)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316637 DEF6-001 ENSG00000023892 9606 + 6:35297852-35321771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000316637
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000316637 0.903±0.00 11.912±0.00 0.167±0.00 0.374±0.13 1.539±0.12 0.924±0.71 0.569±0.00 0.390±0.18 1.091±0.55 4.247±2.22 1.871±1.28 7.681±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0001 VISTA 6:35189352-35792826
CIL_0002ER CIL_0002ER_0001 CGP 6:35258909-35321771
CIL_0004LU CIL_0004LU_0002 CGP 6:35297852-35428191

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005911 IEA cell-cell junction
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002327 Def6-001 protein_coding Mus_musculus 0 2335

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