C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin protein ligase E3 component n-recognin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372899 UBR2-001 ENSG00000024048 9606 + 6:42564062-42693504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000372899
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000372899 0.993±0.00 0.944±0.00 0.530±0.00 0.443±0.00 1.134±0.00 2.017±0.71 0.916±0.25 2.089±0.08 0.849±0.00 0.958±0.00 1.798±0.35 0.295±0.00 0.645±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0000785 IEA chromatin
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005886 IDA plasma membrane
GO:0006342 ISS chromatin silencing
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007141 IEA male meiosis I
GO:0007283 IEA spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0030163 IEA protein catabolic process
GO:0032007 IMP negative regulation of TOR signaling
GO:0033522 ISS histone H2A ubiquitination
GO:0070728 IDA leucine binding
GO:0071233 IDA cellular response to leucine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113337 Ubr2-202 protein_coding Mus_musculus 0 5430
ENSMUST00000113335 Ubr2-201 protein_coding Mus_musculus 0 5280

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