C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thymidine phosphorylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000025708 TYMP 9606 - 22:50525752-50530085 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252029 TYMP-001 50525752-50530056 protein_coding
  ENST00000395678 TYMP-005 50525756-50530032 protein_coding
  ENST00000395680 TYMP-006 50525752-50529999 protein_coding
  ENST00000395681 TYMP-003 50525752-50530015 protein_coding
  ENST00000425169 TYMP-008 50525785-50529990 protein_coding
  ENST00000476284 TYMP-002 50525757-50530018 retained_intron
  ENST00000487162 TYMP-004 50527792-50530012 retained_intron
  ENST00000487577 TYMP-007 50525755-50529996 retained_intron
  ENST00000613148 TYMP-201 50525755-50530085 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000252029ENST00000395678ENST00000395681ENST00000425169ENST00000476284ENST00000487162ENST00000487577
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000252029 49.968±0.00 32.684±0.00 N/A 3.846±0.00 35.824±0.00 6.301±3.00 14.094±0.00 53.181±0.00 77.862±0.00 3.081±0.00 N/A 8.649±0.00 53.225±1.43
ENST00000395678 N/A N/A N/A N/A N/A 6.835±0.00 N/A N/A N/A 58.183±0.00 2.542±0.00 N/A 29.916±10.57
ENST00000395681 N/A 32.014±0.00 N/A N/A 3.406±0.00 6.191±0.00 N/A 5.626±0.00 N/A N/A N/A 30.309±21.70 23.792±0.00
ENST00000425169 N/A N/A N/A N/A N/A N/A N/A 33.928±0.00 N/A 77.902±0.00 3.727±0.00 N/A N/A
ENST00000476284 N/A N/A N/A N/A 5.173±0.00 N/A 0.709±0.00 N/A N/A 3.002±0.00 0.570±0.00 6.818±0.00 N/A
ENST00000487162 N/A N/A 1.067±0.00 N/A 1.762±0.00 0.868±0.00 0.283±0.00 0.862±0.00 2.006±0.00 21.661±0.00 0.321±0.00 N/A N/A
ENST00000487577 53.097±0.00 49.620±0.00 N/A 7.029±0.00 20.457±17.77 4.799±0.00 N/A N/A N/A 60.411±0.00 N/A 11.441±8.91 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V1 CIL_0000V1_0002 CGP 22:50508216-50526439
CIL_00025U CIL_00025U_0001 CGP 22:50523568-50530085
CIL_0002WN CIL_0002WN_0001 CGP 22:50525752-50532580

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000002 TAS mitochondrial genome maintenance
GO:0001525 IEA angiogenesis
GO:0004645 IEA phosphorylase activity
GO:0005161 TAS platelet-derived growth factor receptor binding
GO:0005829 TAS cytosol
GO:0006206 TAS:IEA pyrimidine nucleobase metabolic process
GO:0006213 IEA pyrimidine nucleoside metabolic process
GO:0006220 TAS pyrimidine nucleotide metabolic process
GO:0006260 TAS DNA replication
GO:0006935 IEA chemotaxis
GO:0008083 IEA growth factor activity
GO:0008152 IEA metabolic process
GO:0009032 IEA thymidine phosphorylase activity
GO:0016154 IEA pyrimidine-nucleoside phosphorylase activity
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0016763 EXP:IEA transferase activity, transferring pentosyl groups
GO:0030154 IEA cell differentiation
GO:0043097 TAS pyrimidine nucleoside salvage
GO:0044281 TAS small molecule metabolic process
GO:0046135 TAS pyrimidine nucleoside catabolic process
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022615 Tymp thymidine phosphorylase protein_coding Mus_musculus

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