C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymidine phosphorylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487162 TYMP-004 ENSG00000025708 9606 - 22:50527792-50530012 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleENST00000487162
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle
ENST00000487162 1.067±0.00 1.762±0.00 0.868±0.00 0.283±0.00 0.862±0.00 2.006±0.00 21.661±0.00 0.321±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V1 CIL_0000V1_0002 CGP 22:50508216-50526439
CIL_00025U CIL_00025U_0001 CGP 22:50523568-50530085
CIL_0002WN CIL_0002WN_0001 CGP 22:50525752-50532580

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000125797 Atp13a2-003 retained_intron Mus_musculus 0.0000008 60

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