C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: karyopherin alpha 6 (importin alpha 7)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000025800 KPNA6 9606 + 1:32108038-32176568 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373625 KPNA6-001 32108038-32176568 protein_coding
  ENST00000446515 KPNA6-004 32156862-32167296 protein_coding
  ENST00000469790 KPNA6-003 32142923-32162394 processed_transcript
  ENST00000471599 KPNA6-002 32108058-32173173 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373625ENST00000469790
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373625 13.411±0.00 4.426±0.00 3.354±0.00 5.522±4.31 6.623±3.63 5.866±1.16 8.248±4.65 2.030±1.57 4.319±0.73 3.849±0.36 10.813±3.63 7.757±2.32 9.216±2.58 13.086±2.25
ENST00000469790 N/A N/A 4.973±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0001 VISTA 1:31744429-32345312

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IEA protein import into nucleus
GO:0006607 TAS NLS-bearing protein import into nucleus
GO:0008565 IEA protein transporter activity
GO:0016020 IDA membrane
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0060135 IEA maternal process involved in female pregnancy

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044980 KPNA6 karyopherin alpha 6 (importin alpha 7) protein_coding Danio_rerio
ENSMUSG00000003731 Kpna6 karyopherin (importin) alpha 6 protein_coding Mus_musculus

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