C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000027847 B4GALT7 9606 + 5:177600100-177610347 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000029410 B4GALT7-001 177600100-177610347 protein_coding
  ENST00000502420 B4GALT7-002 177600132-177608214 retained_intron
  ENST00000505145 B4GALT7-004 177605791-177610266 retained_intron
  ENST00000505433 B4GALT7-009 177600162-177609707 nonsense_mediated_decay
  ENST00000505468 B4GALT7-007 177600230-177607338 protein_coding
  ENST00000507061 B4GALT7-008 177604312-177605224 protein_coding
  ENST00000510761 B4GALT7-006 177600206-177607357 protein_coding
  ENST00000515353 B4GALT7-005 177607365-177610328 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000029410ENST00000502420ENST00000505145ENST00000505433ENST00000505468ENST00000507061ENST00000510761ENST00000515353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000029410 5.888±0.00 6.754±0.00 0.249±0.00 1.558±0.10 5.435±4.67 6.301±0.00 1.573±1.18 6.819±6.13 7.929±0.00 2.579±1.84 2.487±2.40 11.824±6.81 20.103±1.79 9.677±0.37
ENST00000502420 N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A 0.301±0.00 N/A N/A N/A N/A N/A
ENST00000505145 N/A 2.939±0.00 0.089±0.00 0.915±0.00 0.166±0.00 0.112±0.00 0.149±0.00 0.146±0.00 0.744±0.00 0.400±0.16 N/A 1.495±1.13 N/A 2.278±0.00
ENST00000505433 2.967±0.00 N/A N/A 2.172±0.00 N/A N/A 2.145±0.00 0.453±0.00 N/A 0.382±0.00 0.250±0.00 N/A N/A N/A
ENST00000505468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.929±0.00 N/A N/A
ENST00000507061 N/A N/A N/A N/A 15.266±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510761 N/A N/A 0.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515353 N/A N/A N/A N/A 0.120±0.00 N/A N/A 0.398±0.00 N/A N/A N/A 0.107±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_000387 CIL_000387_0001 CGP 5:177592158-177610347

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003831 IDA beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005794 IDA Golgi apparatus
GO:0005975 IEA:TAS carbohydrate metabolic process
GO:0006024 IDA glycosaminoglycan biosynthetic process
GO:0006029 IMP proteoglycan metabolic process
GO:0006464 TAS cellular protein modification process
GO:0006487 IDA protein N-linked glycosylation
GO:0008378 IDA galactosyltransferase activity
GO:0016021 IDA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030145 IDA manganese ion binding
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0043206 IMP extracellular fibril organization
GO:0044281 TAS small molecule metabolic process
GO:0046525 IDA xylosylprotein 4-beta-galactosyltransferase activity
GO:0048147 IMP negative regulation of fibroblast proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021899 b4galt7 xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) protein_coding Danio_rerio
ENSMUSG00000021504 B4galt7 xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) protein_coding Mus_musculus

Loading