C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000029410 B4GALT7-001 ENSG00000027847 9606 + 5:177600100-177610347 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000029410
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000029410 5.888±0.00 6.754±0.00 0.249±0.00 1.558±0.10 5.435±4.67 6.301±0.00 1.573±1.18 6.819±6.13 7.929±0.00 2.579±1.84 2.487±2.40 11.824±6.81 20.103±1.79 9.677±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_000387 CIL_000387_0001 CGP 5:177592158-177610347

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003831 IDA beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005794 IDA Golgi apparatus
GO:0005975 IEA:TAS carbohydrate metabolic process
GO:0006024 IDA glycosaminoglycan biosynthetic process
GO:0006029 IMP proteoglycan metabolic process
GO:0006464 TAS cellular protein modification process
GO:0006487 IDA protein N-linked glycosylation
GO:0008378 IDA galactosyltransferase activity
GO:0016021 IDA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030145 IDA manganese ion binding
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0043206 IMP extracellular fibril organization
GO:0044281 TAS small molecule metabolic process
GO:0046525 IDA xylosylprotein 4-beta-galactosyltransferase activity
GO:0048147 IMP negative regulation of fibroblast proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064701 B4galt7-002 protein_coding Mus_musculus 0 1236
ENSMUST00000100764 B4galt7-001 protein_coding Mus_musculus 0 928
ENSMUST00000133176 B4galt7-004 protein_coding Mus_musculus 0 894
ENSMUST00000142654 B4galt7-003 retained_intron Mus_musculus 0 640

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