C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000387_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184840-ENSG00000027847 CGP 9606 5:177592158-177610347
GeneTranscriptPositionBiotype
ENSG00000027847 (B4GALT7)
xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 		ENST00000029410 (B4GALT7-001) 177600100-177610347 protein_coding
ENST00000502420 (B4GALT7-002) 177600132-177608214 retained_intron
ENST00000505145 (B4GALT7-004) 177605791-177610266 retained_intron
ENST00000505433 (B4GALT7-009) 177600162-177609707 nonsense_mediated_decay
ENST00000505468 (B4GALT7-007) 177600230-177607338 protein_coding
ENST00000507061 (B4GALT7-008) 177604312-177605224 protein_coding
ENST00000510761 (B4GALT7-006) 177600206-177607357 protein_coding
ENST00000515353 (B4GALT7-005) 177607365-177610328 retained_intron
ENSG00000184840 (TMED9)
transmembrane emp24 protein transport domain containing 9 		ENST00000332598 (TMED9-001) 177592158-177596124 protein_coding
ENST00000505521 (TMED9-003) 177592217-177594115 retained_intron
ENST00000507578 (TMED9-005) 177592650-177594195 processed_transcript
ENST00000507723 (TMED9-002) 177592272-177595420 retained_intron
ENST00000510499 (TMED9-006) 177593222-177595386 retained_intron
ENST00000513799 (TMED9-004) 177592488-177595577 retained_intron
CIL_000387_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058569-ENSMUSG00000021504 CGP 10090 13:55593135-55610443
GeneTranscriptPositionBiotype
ENSMUSG00000021504 (B4galt7)
xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) 		ENSMUST00000064701 (B4galt7-002) 55600065-55610442 protein_coding
ENSMUST00000100764 (B4galt7-001) 55599896-55610443 protein_coding
ENSMUST00000133176 (B4galt7-004) 55600065-55608802 protein_coding
ENSMUST00000142654 (B4galt7-003) 55600065-55608018 retained_intron
ENSMUSG00000058569 (Tmed9)
transmembrane emp24 protein transport domain containing 9 		ENSMUST00000109905 (Tmed9-201) 55593135-55597663 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000387_0001ENSG00000027847ENST00000029410ENST00000502420ENST00000505145ENST00000505433ENST00000505468ENST00000507061ENST00000510761ENST00000515353ENSG00000184840ENST00000332598ENST00000505521ENST00000507578ENST00000507723ENST00000510499ENST00000513799CIL_000387_0002ENSMUSG00000021504ENSMUST00000064701ENSMUST00000100764ENSMUST00000133176ENSMUST00000142654ENSMUSG00000058569ENSMUST00000109905
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000387_0001ENSG00000027847ENST00000029410ENST00000502420ENST00000505145ENST00000505433ENST00000505468ENST00000507061ENST00000510761ENST00000515353ENSG00000184840ENST00000332598ENST00000505521ENST00000513799CIL_000387_0002ENSMUSG00000021504ENSMUST00000064701ENSMUST00000133176ENSMUST00000142654ENSMUSG00000058569ENSMUST00000109905
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000027847 ENST00000029410 5.888±0.00 6.754±0.00 0.249±0.00 1.558±0.10 5.435±4.67 6.301±0.00 1.573±1.18 6.819±6.13 7.929±0.00 2.579±1.84 2.487±2.40 11.824±6.81 20.103±1.79 9.677±0.37
ENST00000502420 N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A 0.301±0.00 N/A N/A N/A N/A N/A
ENST00000505145 N/A 2.939±0.00 0.089±0.00 0.915±0.00 0.166±0.00 0.112±0.00 0.149±0.00 0.146±0.00 0.744±0.00 0.400±0.16 N/A 1.495±1.13 N/A 2.278±0.00
ENST00000505433 2.967±0.00 N/A N/A 2.172±0.00 N/A N/A 2.145±0.00 0.453±0.00 N/A 0.382±0.00 0.250±0.00 N/A N/A N/A
ENST00000505468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.929±0.00 N/A N/A
ENST00000507061 N/A N/A N/A N/A 15.266±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510761 N/A N/A 0.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515353 N/A N/A N/A N/A 0.120±0.00 N/A N/A 0.398±0.00 N/A N/A N/A 0.107±0.00 N/A N/A
ENSG00000184840 ENST00000332598 52.581±0.00 68.788±0.00 10.462±0.00 16.323±6.24 30.384±10.17 30.631±11.24 16.208±10.69 52.650±37.00 78.903±72.17 54.494±44.43 16.085±9.79 51.395±29.99 197.331±30.61 42.425±4.99
ENST00000505521 N/A N/A N/A 3.225±0.00 N/A N/A 2.879±0.00 N/A N/A N/A 6.373±0.00 N/A N/A N/A
ENST00000507578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513799 23.676±0.00 25.098±0.00 N/A N/A 24.368±0.00 16.002±0.00 N/A 30.533±0.00 N/A N/A N/A N/A N/A 19.691±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021504 ENSMUST00000064701 11.163±0.75 7.615±0.53 8.654±2.07 15.791±1.78 7.605±1.74 7.113±1.96 4.009±0.70 5.241±1.06 4.902±1.19 7.225±1.22 2.114±0.58 10.153±4.51 9.141±2.46 4.656±1.91
ENSMUST00000100764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133176 N/A 2.287±0.00 N/A N/A 3.535±0.03 N/A N/A N/A 1.828±0.00 N/A N/A N/A N/A 3.420±0.00
ENSMUST00000142654 N/A 2.434±0.34 N/A 4.703±0.00 2.296±0.22 3.143±0.50 1.021±0.00 1.340±0.00 1.333±0.31 2.044±0.21 N/A 2.606±0.17 N/A 1.279±0.15
ENSMUSG00000058569 ENSMUST00000109905 50.882±8.80 44.258±3.75 76.495±7.33 40.962±3.48 25.178±7.99 44.258±4.69 31.481±1.19 41.104±4.29 40.477±13.27 40.878±2.10 28.133±4.13 56.514±11.54 92.130±22.60 16.786±5.72

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