C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBP-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000028839 TBPL1 9606 + 6:133952170-133990432 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000237264 TBPL1-001 133953195-133990432 protein_coding
  ENST00000367869 TBPL1-004 133953224-133982872 protein_coding
  ENST00000367871 TBPL1-002 133953195-133984723 protein_coding
  ENST00000416965 TBPL1-003 133952170-133984479 protein_coding
  ENST00000457715 TBPL1-005 133952286-133980260 protein_coding
  ENST00000477527 TBPL1-007 133982817-133987499 processed_transcript
  ENST00000481694 TBPL1-006 133984376-133985968 processed_transcript
  ENST00000613034 TBPL1-201 133952170-133987499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000237264ENST00000367869ENST00000367871ENST00000477527ENST00000613034
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000237264 N/A 0.525±0.00 1.273±0.16 0.191±0.06 0.265±0.00 N/A 0.406±0.00 1.023±0.00 0.456±0.00 N/A 0.944±0.41 0.372±0.14 N/A
ENST00000367869 N/A N/A N/A 1.274±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000367871 4.217±0.00 3.664±0.00 7.040±0.00 3.085±0.00 3.377±2.45 N/A 2.855±0.00 2.257±0.00 3.979±1.65 1.953±0.00 5.134±1.01 3.154±0.18 N/A
ENST00000477527 3.805±0.00 5.840±0.00 5.918±0.00 4.275±0.00 4.328±2.85 N/A 5.154±0.00 2.762±0.00 8.063±0.00 N/A 4.374±0.00 2.865±0.13 N/A
ENST00000613034 1.300±0.00 N/A 2.063±0.00 0.797±0.00 N/A 4.121±0.00 N/A 0.552±0.00 1.163±0.00 1.335±0.00 5.627±4.87 2.820±0.90 69.365±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014M CIL_00014M_0002 CGP 6:133889138-133990432
CIL_00014L CIL_00014L_0002 CGP 6:133952170-134052636

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001675 IEA acrosome assembly
GO:0003677 IEA DNA binding
GO:0003713 TAS transcription coactivator activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005672 IEA transcription factor TFIIA complex
GO:0005737 IEA cytoplasm
GO:0006235 IEA dTTP biosynthetic process
GO:0006352 IEA DNA-templated transcription, initiation
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007283 IEA spermatogenesis
GO:0007289 IEA spermatid nucleus differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036868 tbpl1 TBP-like 1 protein_coding Danio_rerio
ENSMUSG00000071359 Tbpl1 TATA box binding protein-like 1 protein_coding Mus_musculus

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