C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBP-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613034 TBPL1-201 ENSG00000028839 9606 + 6:133952170-133987499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000613034
Transcript ID Adipose Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000613034 1.300±0.00 2.063±0.00 0.797±0.00 4.121±0.00 0.552±0.00 1.163±0.00 1.335±0.00 5.627±4.87 2.820±0.90 69.365±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014M CIL_00014M_0002 CGP 6:133889138-133990432
CIL_00014L CIL_00014L_0002 CGP 6:133952170-134052636

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003713 TAS transcription coactivator activity
GO:0006352 IEA DNA-templated transcription, initiation
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127698 Tbpl1-001 protein_coding Mus_musculus 0 1391
ENSMUST00000095794 Tbpl1-002 protein_coding Mus_musculus 0 1358
ENSMUST00000141569 Tbpl1-005 processed_transcript Mus_musculus 0 364
ENSMUST00000138022 Tbpl1-004 retained_intron Mus_musculus 0 267
ENSDART00000053534 tbpl1-001 protein_coding Danio_rerio 0 213

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