C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000033011 ALG1 9606 + 16:5033702-5087379 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262374 ALG1-001 5071819-5085587 protein_coding
  ENST00000544428 ALG1-003 5072248-5085057 protein_coding
  ENST00000586840 ALG1-011 5071822-5077469 protein_coding
  ENST00000588623 ALG1-004 5033960-5085390 protein_coding
  ENST00000591783 ALG1-010 5072205-5078852 protein_coding
  ENST00000591822 ALG1-002 5071849-5085018 nonsense_mediated_decay
  ENST00000591961 ALG1-005 5033702-5043999 retained_intron
  ENST00000592661 ALG1-008 5085071-5087379 processed_transcript
  ENST00000592793 ALG1-009 5071843-5073428 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262374ENST00000544428ENST00000586840ENST00000588623ENST00000591783ENST00000591822ENST00000592661
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262374 N/A N/A N/A N/A N/A N/A 0.784±0.00 N/A N/A N/A N/A N/A
ENST00000544428 N/A N/A 1.531±0.00 N/A N/A N/A N/A N/A N/A 7.813±5.16 9.764±2.38 7.254±0.00
ENST00000586840 N/A N/A N/A N/A N/A N/A N/A 2.849±0.00 N/A N/A N/A N/A
ENST00000588623 N/A N/A N/A N/A 1.284±0.00 N/A N/A 0.494±0.00 N/A N/A N/A N/A
ENST00000591783 5.325±0.00 N/A N/A N/A N/A 2.011±0.00 N/A N/A 1.301±0.00 7.355±1.64 13.769±0.00 17.014±0.00
ENST00000591822 2.466±0.00 10.148±0.00 N/A 5.848±0.00 2.749±0.00 5.812±0.00 6.488±0.00 N/A N/A N/A 4.105±0.00 6.414±0.00
ENST00000592661 N/A N/A N/A N/A 1.492±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004S CIL_00004S_0001 CGP 16:4958317-5034141

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000030 TAS mannosyltransferase activity
GO:0004578 IEA chitobiosyldiphosphodolichol beta-mannosyltransferase activity
GO:0005783 TAS endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006486 TAS protein glycosylation
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0008152 IEA metabolic process
GO:0009058 IEA biosynthetic process
GO:0009103 TAS lipopolysaccharide biosynthetic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054963 alg1 asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase) protein_coding Danio_rerio
ENSMUSG00000039427 Alg1 asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase) protein_coding Mus_musculus

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