C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591822 ALG1-002 ENSG00000033011 9606 + 16:5071849-5085018 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverPlacentaTestisENST00000591822
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Placenta Testis
ENST00000591822 2.466±0.00 10.148±0.00 5.848±0.00 2.749±0.00 5.812±0.00 6.488±0.00 4.105±0.00 6.414±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004S CIL_00004S_0001 CGP 16:4958317-5034141

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100196 Alg1-002 protein_coding Mus_musculus 0 1085
ENSMUST00000049207 Alg1-001 protein_coding Mus_musculus 0 1044
ENSMUST00000153730 Alg1-005 retained_intron Mus_musculus 0 462
ENSMUST00000147530 Alg1-004 processed_transcript Mus_musculus 0 372
ENSMUST00000142902 Alg1-003 retained_intron Mus_musculus 0 313

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