C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039427 Alg1 10090 + 16:5233621-5244912 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049207 Alg1-001 5233638-5244912 protein_coding
  ENSMUST00000100196 Alg1-002 5233621-5244903 protein_coding
  ENSMUST00000142902 Alg1-003 5240074-5243724 retained_intron
  ENSMUST00000147530 Alg1-004 5235170-5240518 processed_transcript
  ENSMUST00000153730 Alg1-005 5233638-5239738 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100196ENSMUST00000147530ENSMUST00000153730
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100196 9.935±1.99 23.653±7.75 19.032±0.70 9.866±2.68 16.390±5.60 15.619±4.95 6.476±2.57 18.956±7.88 9.191±2.88 16.541±5.37 5.028±0.63 21.659±7.84 13.991±1.96 6.634±2.01
ENSMUST00000147530 N/A N/A N/A 10.418±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153730 N/A 22.344±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BU CIL_0002BU_0002 CGP 16:5211828-5244912
CIL_00046A CIL_00046A_0002 CGP 16:5233621-5255983

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004578 IEA chitobiosyldiphosphodolichol beta-mannosyltransferase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006486 IEA protein glycosylation
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054963 alg1 asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase) protein_coding Danio_rerio
ENSG00000033011 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase protein_coding Homo_sapiens
ENSG00000189366 ALG1L ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like protein_coding Homo_sapiens
ENSG00000251287 ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2 protein_coding Homo_sapiens

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