C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, ZZ-type containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000036549 ZZZ3 9606 - 1:77562416-77683419 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370798 ZZZ3-002 77564888-77683419 protein_coding
  ENST00000370801 ZZZ3-001 77564500-77682658 protein_coding
  ENST00000414381 ZZZ3-009 77633246-77683374 protein_coding
  ENST00000433749 ZZZ3-010 77633182-77682675 protein_coding
  ENST00000458763 ZZZ3-008 77676982-77682675 processed_transcript
  ENST00000463166 ZZZ3-006 77633312-77683403 processed_transcript
  ENST00000469944 ZZZ3-007 77640954-77682643 processed_transcript
  ENST00000474746 ZZZ3-011 77581818-77585059 processed_transcript
  ENST00000476195 ZZZ3-005 77581018-77585043 processed_transcript
  ENST00000476275 ZZZ3-003 77564506-77632876 processed_transcript
  ENST00000481346 ZZZ3-004 77562416-77631921 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370798ENST00000370801ENST00000481346
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370798 N/A N/A N/A N/A 1.093±0.00 N/A N/A N/A 0.806±0.00 N/A N/A 1.184±0.00 N/A N/A
ENST00000370801 2.438±0.00 3.314±0.00 2.468±0.00 3.325±1.07 3.337±0.86 3.078±0.43 3.270±0.50 4.377±0.10 3.821±2.46 2.905±1.36 2.106±0.11 3.480±1.13 2.433±1.71 4.362±0.27
ENST00000481346 1.056±0.00 1.524±0.00 N/A N/A 1.451±0.00 1.521±0.11 0.869±0.00 1.986±0.00 0.740±0.00 0.744±0.00 1.712±0.00 1.780±0.62 0.838±0.59 1.423±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0001 VISTA 1:77533579-78136618

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0005671 IEA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077581 zzz3 zinc finger, ZZ-type containing 3 protein_coding Danio_rerio
ENSMUSG00000039068 Zzz3 zinc finger, ZZ domain containing 3 protein_coding Mus_musculus

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