C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, ZZ domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039068 Zzz3 10090 + 3:152395473-152462826 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089982 Zzz3-002 152396684-152459477 protein_coding
  ENSMUST00000106100 Zzz3-001 152396003-152462826 protein_coding
  ENSMUST00000106101 Zzz3-201 152396694-152462826 protein_coding
  ENSMUST00000106103 Zzz3-003 152395473-152459474 protein_coding
  ENSMUST00000135044 Zzz3-005 152457417-152458535 processed_transcript
  ENSMUST00000138115 Zzz3-004 152395525-152427620 processed_transcript
  ENSMUST00000150802 Zzz3-006 152396032-152449128 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089982ENSMUST00000106100ENSMUST00000106101ENSMUST00000106103ENSMUST00000150802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089982 2.528±0.53 N/A N/A N/A 1.696±0.06 N/A 0.587±0.00 N/A 1.254±0.53 N/A 0.965±0.33 8.203±2.47 7.305±3.63 2.851±0.00
ENSMUST00000106100 3.700±0.42 2.400±1.41 2.777±0.05 6.890±2.38 1.084±0.16 1.919±1.13 1.444±0.43 3.162±0.79 1.860±0.77 2.213±1.11 0.817±0.26 5.672±0.98 3.307±1.56 0.673±0.00
ENSMUST00000106101 N/A N/A 3.569±0.03 3.218±0.56 2.018±0.00 0.850±0.00 0.749±0.00 N/A 1.142±0.57 N/A 0.570±0.07 7.086±0.26 1.756±0.12 1.354±0.00
ENSMUST00000106103 3.865±1.96 4.460±1.02 3.126±0.30 3.356±0.00 3.219±0.55 2.971±0.33 1.304±0.25 2.929±0.00 3.187±1.36 2.852±0.00 N/A 5.753±1.28 6.012±1.18 4.120±0.62
ENSMUST00000150802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.524±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0002 VISTA 3:152003123-152605850
CIL_0007KB CIL_0007KB_0002 UCNEbase 3:152232542-152459476
CIL_0002Y2 CIL_0002Y2_0002 CGP 3:152346478-152462826
CIL_0002XM CIL_0002XM_0002 CGP 3:152395473-152668140

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077581 zzz3 zinc finger, ZZ-type containing 3 protein_coding Danio_rerio
ENSG00000036549 ZZZ3 zinc finger, ZZ-type containing 3 protein_coding Homo_sapiens

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