C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, ZZ-type containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370801 ZZZ3-001 ENSG00000036549 9606 - 1:77564500-77682658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370801
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370801 2.438±0.00 3.314±0.00 2.468±0.00 3.325±1.07 3.337±0.86 3.078±0.43 3.270±0.50 4.377±0.10 3.821±2.46 2.905±1.36 2.106±0.11 3.480±1.13 2.433±1.71 4.362±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0001 VISTA 1:77533579-78136618

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0005671 IEA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106101 Zzz3-201 protein_coding Mus_musculus 0 4481
ENSMUST00000106100 Zzz3-001 protein_coding Mus_musculus 0 4481
ENSMUST00000089982 Zzz3-002 protein_coding Mus_musculus 0 4460
ENSMUST00000106103 Zzz3-003 protein_coding Mus_musculus 0 2484
ENSMUST00000150802 Zzz3-006 processed_transcript Mus_musculus 0 1989
ENSMUST00000119275 Gm8261-001 processed_pseudogene Mus_musculus 0 1465
ENSMUST00000138115 Zzz3-004 processed_transcript Mus_musculus 0 682
ENSMUST00000135044 Zzz3-005 processed_transcript Mus_musculus 0 353
ENSMUST00000118561 Gm15040-001 processed_pseudogene Mus_musculus 0 344

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