C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000042317 SPATA7 9606 + 14:88384924-88470350 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000045347 SPATA7-004 88385819-88438455 protein_coding
  ENST00000356583 SPATA7-201 88385668-88438458 protein_coding
  ENST00000393545 SPATA7-002 88385530-88438456 protein_coding
  ENST00000553303 SPATA7-019 88432623-88438077 retained_intron
  ENST00000553626 SPATA7-003 88385691-88438453 retained_intron
  ENST00000553885 SPATA7-015 88385698-88426585 protein_coding
  ENST00000553908 SPATA7-018 88385744-88426520 nonsense_mediated_decay
  ENST00000554102 SPATA7-012 88385676-88410783 processed_transcript
  ENST00000554168 SPATA7-006 88385638-88416844 nonsense_mediated_decay
  ENST00000554802 SPATA7-020 88433157-88455283 protein_coding
  ENST00000555356 SPATA7-010 88385673-88416761 nonsense_mediated_decay
  ENST00000555401 SPATA7-014 88385690-88426446 protein_coding
  ENST00000555515 SPATA7-013 88385678-88426685 nonsense_mediated_decay
  ENST00000555534 SPATA7-008 88385649-88426517 nonsense_mediated_decay
  ENST00000555715 SPATA7-011 88385673-88396203 nonsense_mediated_decay
  ENST00000556406 SPATA7-021 88431171-88470350 protein_coding
  ENST00000556553 SPATA7-001 88384924-88438460 protein_coding
  ENST00000556666 SPATA7-005 88415926-88438455 retained_intron
  ENST00000556870 SPATA7-007 88385644-88426504 nonsense_mediated_decay
  ENST00000557248 SPATA7-017 88385739-88426602 nonsense_mediated_decay
  ENST00000557567 SPATA7-016 88385700-88393636 retained_intron
  ENST00000557724 SPATA7-009 88385673-88396193 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000045347ENST00000356583ENST00000393545ENST00000556666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000045347 N/A N/A 2.907±0.00 N/A 3.754±0.00 2.386±0.00 2.139±0.00 N/A 5.388±0.00 6.163±0.00 N/A N/A N/A
ENST00000356583 2.442±0.00 2.185±0.00 N/A 4.513±0.00 4.222±0.00 3.322±0.00 N/A 4.171±0.00 N/A N/A 1.092±0.00 3.609±1.20 31.619±7.64
ENST00000393545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.127±0.00 N/A
ENST00000556666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.521±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KO CIL_0004KO_0001 CGP 14:88180103-88470350
CIL_0004KP CIL_0004KP_0001 CGP 14:88384924-88554733

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007601 IEA visual perception
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075898 spata7 spermatogenesis associated 7 protein_coding Danio_rerio
ENSMUSG00000021007 Spata7 spermatogenesis associated 7 protein_coding Mus_musculus

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