C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0004KP_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000042317-ENSG00000070778 | CGP | 9606 | 14:88384924-88554733  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000042317  (SPATA7)spermatogenesis associated 7 |
ENST00000045347 (SPATA7-004)
|
88385819-88438455 | protein_coding | |
|
ENST00000356583 (SPATA7-201)
|
88385668-88438458 | protein_coding | ||
|
ENST00000393545 (SPATA7-002)
|
88385530-88438456 | protein_coding | ||
|
ENST00000553303 (SPATA7-019)
|
88432623-88438077 | retained_intron | ||
|
ENST00000553626 (SPATA7-003)
|
88385691-88438453 | retained_intron | ||
|
ENST00000553885 (SPATA7-015)
|
88385698-88426585 | protein_coding | ||
|
ENST00000553908 (SPATA7-018)
|
88385744-88426520 | nonsense_mediated_decay | ||
|
ENST00000554102 (SPATA7-012)
|
88385676-88410783 | processed_transcript | ||
|
ENST00000554168 (SPATA7-006)
|
88385638-88416844 | nonsense_mediated_decay | ||
|
ENST00000554802 (SPATA7-020)
|
88433157-88455283 | protein_coding | ||
|
ENST00000555356 (SPATA7-010)
|
88385673-88416761 | nonsense_mediated_decay | ||
|
ENST00000555401 (SPATA7-014)
|
88385690-88426446 | protein_coding | ||
|
ENST00000555515 (SPATA7-013)
|
88385678-88426685 | nonsense_mediated_decay | ||
|
ENST00000555534 (SPATA7-008)
|
88385649-88426517 | nonsense_mediated_decay | ||
|
ENST00000555715 (SPATA7-011)
|
88385673-88396203 | nonsense_mediated_decay | ||
|
ENST00000556406 (SPATA7-021)
|
88431171-88470350 | protein_coding | ||
|
ENST00000556553 (SPATA7-001)
|
88384924-88438460 | protein_coding | ||
|
ENST00000556666 (SPATA7-005)
|
88415926-88438455 | retained_intron | ||
|
ENST00000556870 (SPATA7-007)
|
88385644-88426504 | nonsense_mediated_decay | ||
|
ENST00000557248 (SPATA7-017)
|
88385739-88426602 | nonsense_mediated_decay | ||
|
ENST00000557567 (SPATA7-016)
|
88385700-88393636 | retained_intron | ||
|
ENST00000557724 (SPATA7-009)
|
88385673-88396193 | nonsense_mediated_decay | ||
|
ENSG00000070778 (PTPN21) protein tyrosine phosphatase, non-receptor type 21 |
ENST00000328736 (PTPN21-201)
|
88465778-88550622 | protein_coding | |
|
ENST00000536337 (PTPN21-003)
|
88467955-88550530 | nonsense_mediated_decay | ||
|
ENST00000553531 (PTPN21-008)
|
88467770-88469616 | protein_coding | ||
|
ENST00000554178 (PTPN21-007)
|
88512318-88550619 | processed_transcript | ||
|
ENST00000554270 (PTPN21-004)
|
88467955-88550530 | retained_intron | ||
|
ENST00000554628 (PTPN21-002)
|
88492900-88551489 | processed_transcript | ||
|
ENST00000555243 (PTPN21-005)
|
88504425-88551460 | protein_coding | ||
|
ENST00000556564 (PTPN21-001)
|
88465781-88554733 | protein_coding | ||
|
ENST00000557249 (PTPN21-006)
|
88469965-88473932 | retained_intron | ||
|
ENSG00000222990 (RNU4-22P) RNA, U4 small nuclear 22, pseudogene |
ENST00000411058 (RNU4-22P-201)
|
88513498-88513663 | snRNA | |
|
ENSG00000258789 (RP11-507K2.3) |
ENST00000556328 (RP11-507K2.3-001)
|
88551597-88552493 | antisense | |
| CIL_0004KP_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000021007-ENSMUSG00000021009 | CGP | 10090 | 12:98628157-98737405 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000021007 (Spata7) spermatogenesis associated 7 |
ENSMUST00000048402 (Spata7-001)
|
98628157-98669815 | protein_coding | |
|
ENSMUST00000101144 (Spata7-005)
|
98628167-98669815 | protein_coding | ||
|
ENSMUST00000101146 (Spata7-003)
|
98628197-98669812 | protein_coding | ||
|
ENSMUST00000130136 (Spata7-004)
|
98628190-98632755 | retained_intron | ||
|
ENSMUST00000152482 (Spata7-006)
|
98663645-98669278 | retained_intron | ||
|
ENSMUST00000155899 (Spata7-002)
|
98628162-98638902 | retained_intron | ||
|
ENSMUSG00000021009 (Ptpn21) protein tyrosine phosphatase, non-receptor type 21 |
ENSMUST00000085116 (Ptpn21-201)
|
98676741-98734645 | protein_coding | |
|
ENSMUST00000170188 (Ptpn21-202)
|
98676741-98737405 | protein_coding | ||
Expression Patterns
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