C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356583 SPATA7-201 ENSG00000042317 9606 + 14:88385668-88438458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyMuscleOvaryTestisENST00000356583
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Muscle Ovary Testis
ENST00000356583 2.442±0.00 2.185±0.00 4.513±0.00 4.222±0.00 3.322±0.00 4.171±0.00 1.092±0.00 3.609±1.20 31.619±7.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KO CIL_0004KO_0001 CGP 14:88180103-88470350
CIL_0004KP CIL_0004KP_0001 CGP 14:88384924-88554733

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007601 IEA visual perception
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101146 Spata7-003 protein_coding Mus_musculus 0 311
ENSMUST00000101144 Spata7-005 protein_coding Mus_musculus 4e-29 134
ENSMUST00000155899 Spata7-002 retained_intron Mus_musculus 4e-29 134
ENSMUST00000048402 Spata7-001 protein_coding Mus_musculus 4e-29 134
ENSMUST00000130136 Spata7-004 retained_intron Mus_musculus 2e-28 132

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