C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycoprotein M6B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000046653 GPM6B 9606 - X:13771031-13938638 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316715 GPM6B-003 13771031-13817342 protein_coding
  ENST00000355135 GPM6B-008 13773954-13817069 protein_coding
  ENST00000356942 GPM6B-002 13773954-13817346 protein_coding
  ENST00000398361 GPM6B-005 13774337-13938415 protein_coding
  ENST00000454189 GPM6B-001 13771456-13938638 protein_coding
  ENST00000468080 GPM6B-011 13779908-13889612 protein_coding
  ENST00000472735 GPM6B-010 13772854-13781005 protein_coding
  ENST00000475307 GPM6B-004 13783449-13817323 protein_coding
  ENST00000493085 GPM6B-012 13779853-13889057 protein_coding
  ENST00000493677 GPM6B-007 13772699-13817069 protein_coding
  ENST00000495211 GPM6B-009 13776167-13783921 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316715ENST00000355135ENST00000356942ENST00000454189ENST00000472735ENST00000493677
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A
ENST00000355135 N/A N/A N/A 47.053±0.00 1.660±0.20 10.052±0.00 0.612±0.00 N/A 1.402±0.00 N/A N/A N/A N/A N/A
ENST00000356942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.761±0.00 N/A N/A
ENST00000454189 2.136±0.00 1.015±0.00 0.419±0.00 69.700±32.55 1.102±0.28 10.757±0.00 0.512±0.06 1.817±1.54 0.781±0.69 3.275±2.01 0.094±0.05 0.400±0.18 0.200±0.08 0.971±0.00
ENST00000472735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.781±0.00 N/A 0.621±0.00 N/A
ENST00000493677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.579±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OC CIL_0000OC_0002 CGP X:13734745-13938638

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0003674 ND molecular_function
GO:0005886 ISS plasma membrane
GO:0007399 NAS nervous system development
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0030501 IMP positive regulation of bone mineralization
GO:0032956 IMP regulation of actin cytoskeleton organization
GO:0045121 ISS membrane raft
GO:0051612 ISS negative regulation of serotonin uptake
GO:0051893 IMP regulation of focal adhesion assembly
GO:0085029 IMP extracellular matrix assembly
GO:2000009 ISS negative regulation of protein localization to cell surface

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001676 gpm6bb glycoprotein M6Bb protein_coding Danio_rerio
ENSMUSG00000031342 Gpm6b glycoprotein m6b protein_coding Mus_musculus

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