C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: THO complex 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000051596 THOC3 9606 - 5:175917873-176034680 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265097 THOC3-001 175959527-175968299 protein_coding
  ENST00000432305 THOC3-003 175917873-175961324 protein_coding
  ENST00000505969 THOC3-008 175959591-175961413 protein_coding
  ENST00000510300 THOC3-005 175961051-175967544 processed_transcript
  ENST00000511062 THOC3-011 175961081-176034612 nonsense_mediated_decay
  ENST00000513006 THOC3-007 175961365-175968268 nonsense_mediated_decay
  ENST00000513118 THOC3-006 175961142-175965268 retained_intron
  ENST00000513482 THOC3-004 175960219-175968280 protein_coding
  ENST00000514250 THOC3-009 175961420-176034606 nonsense_mediated_decay
  ENST00000514861 THOC3-010 175959883-176034680 protein_coding
  ENST00000515016 THOC3-002 175926559-175961117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265097ENST00000432305ENST00000505969ENST00000511062ENST00000513006ENST00000513482ENST00000514861
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265097 N/A 0.948±0.00 0.206±0.00 0.989±0.48 0.348±0.00 0.830±0.00 0.093±0.00 0.739±0.09 0.324±0.26 0.633±0.29 0.065±0.00 1.038±0.80 1.810±0.31 2.159±0.42
ENST00000432305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.323±0.00 N/A N/A N/A
ENST00000505969 N/A N/A 0.636±0.00 0.705±0.00 N/A N/A 0.155±0.00 1.559±0.00 N/A 0.578±0.00 0.257±0.00 3.715±2.31 0.708±0.00 N/A
ENST00000511062 N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A
ENST00000513006 1.760±0.00 N/A N/A N/A 0.603±0.00 N/A 0.111±0.00 N/A N/A 0.576±0.00 N/A N/A 2.026±0.00 N/A
ENST00000513482 N/A 0.284±0.00 0.032±0.00 0.148±0.00 0.357±0.00 0.914±0.00 0.123±0.00 0.153±0.00 0.152±0.00 0.142±0.04 0.073±0.00 0.383±0.03 N/A 2.050±1.03
ENST00000514861 2.946±0.00 2.668±0.00 N/A 1.814±1.16 0.914±0.58 2.126±0.23 0.354±0.20 2.023±0.00 0.485±0.00 0.695±0.00 0.508±0.00 1.423±0.56 N/A 3.062±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZE CIL_0006ZE_0001 CGP 5:175796310-176034680

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000346 IDA transcription export complex
GO:0000445 IDA THO complex part of transcription export complex
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0006397 IEA mRNA processing
GO:0006406 IDA mRNA export from nucleus
GO:0008380 IEA RNA splicing
GO:0046784 IDA viral mRNA export from host cell nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056517 thoc3 THO complex 3 protein_coding Danio_rerio
ENSMUSG00000025872 Thoc3 THO complex 3 protein_coding Mus_musculus

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