C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: THO complex 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025872 Thoc3 10090 - 13:54458837-54468849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026990 Thoc3-001 54458837-54468849 protein_coding
  ENSMUST00000135404 Thoc3-003 54467804-54468826 retained_intron
  ENSMUST00000151158 Thoc3-002 54463682-54468788 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026990ENSMUST00000135404ENSMUST00000151158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026990 12.953±1.25 7.570±1.14 8.035±0.27 11.137±2.74 7.936±0.64 5.347±0.45 5.488±0.54 8.854±0.61 9.456±3.16 8.015±1.21 4.317±0.75 10.388±2.76 16.791±9.35 8.573±0.49
ENSMUST00000135404 12.649±0.12 28.955±9.20 N/A N/A 15.184±3.50 10.353±2.31 N/A 8.650±0.85 7.620±5.04 9.992±2.58 N/A 23.677±3.00 N/A N/A
ENSMUST00000151158 7.299±0.00 5.001±0.09 N/A N/A 5.660±0.85 N/A 1.801±0.00 4.673±0.67 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZE CIL_0006ZE_0002 CGP 13:54371349-54468849

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000346 IEA transcription export complex
GO:0000445 ISS THO complex part of transcription export complex
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0006397 IEA mRNA processing
GO:0006406 IEA mRNA export from nucleus
GO:0008380 IEA RNA splicing
GO:0046784 IEA viral mRNA export from host cell nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056517 thoc3 THO complex 3 protein_coding Danio_rerio
ENSG00000051596 THOC3 THO complex 3 protein_coding Homo_sapiens

Loading