C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thyroid hormone receptor associated protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000054118 THRAP3 9606 + 1:36224416-36305357 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354618 THRAP3-001 36224416-36305357 protein_coding
  ENST00000466743 THRAP3-005 36289718-36294169 processed_transcript
  ENST00000469141 THRAP3-002 36224432-36304148 protein_coding
  ENST00000478853 THRAP3-003 36224433-36282684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354618ENST00000469141
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354618 39.691±0.00 42.284±0.00 7.482±0.00 11.958±8.18 20.328±13.14 10.715±5.76 12.030±8.57 13.568±8.06 8.601±2.96 7.311±3.17 26.210±24.21 22.010±9.34 20.410±4.83 19.967±8.98
ENST00000469141 6.763±0.00 N/A N/A 11.422±0.00 3.865±0.00 1.983±0.00 2.902±1.69 2.304±0.00 N/A 5.618±0.00 3.136±0.00 4.618±2.93 10.012±0.00 9.475±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JI CIL_0004JI_0002 CGP 1:36155579-36305357

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000381 IMP regulation of alternative mRNA splicing, via spliceosome
GO:0000956 IDA nuclear-transcribed mRNA catabolic process
GO:0001104 IDA RNA polymerase II transcription cofactor activity
GO:0003712 IDA transcription cofactor activity
GO:0003713 IDA transcription coactivator activity
GO:0004872 IDA receptor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006367 IDA transcription initiation from RNA polymerase II promoter
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0016592 IDA mediator complex
GO:0030374 NAS ligand-dependent nuclear receptor transcription coactivator activity
GO:0030518 IDA intracellular steroid hormone receptor signaling pathway
GO:0030521 IDA androgen receptor signaling pathway
GO:0035145 IDA exon-exon junction complex
GO:0042809 NAS vitamin D receptor binding
GO:0044822 IDA poly(A) RNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046966 IDA thyroid hormone receptor binding
GO:0048026 IMP positive regulation of mRNA splicing, via spliceosome
GO:0048255 IMP mRNA stabilization
GO:0051219 IDA phosphoprotein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003513 thrap3b thyroid hormone receptor associated protein 3b protein_coding Danio_rerio
ENSDARG00000040095 BX321921.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000044459 thrap3a thyroid hormone receptor associated protein 3a protein_coding Danio_rerio
ENSMUSG00000043962 Thrap3 thyroid hormone receptor associated protein 3 protein_coding Mus_musculus

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