C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chordin-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000054938 CHRDL2 9606 - 11:74696429-74731385 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263671 CHRDL2-001 74696429-74731175 protein_coding
  ENST00000376324 CHRDL2-007 74696429-74719303 nonsense_mediated_decay
  ENST00000376332 CHRDL2-002 74696429-74731385 protein_coding
  ENST00000525413 CHRDL2-009 74696429-74704635 protein_coding
  ENST00000528471 CHRDL2-006 74702794-74719303 nonsense_mediated_decay
  ENST00000528789 CHRDL2-003 74702794-74731182 protein_coding
  ENST00000529912 CHRDL2-010 74696429-74697694 protein_coding
  ENST00000534159 CHRDL2-004 74700922-74731153 processed_transcript
  ENST00000534276 CHRDL2-005 74702794-74719303 nonsense_mediated_decay
  ENST00000622063 CHRDL2-201 74696509-74731385 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263671ENST00000376324ENST00000376332ENST00000525413ENST00000528789ENST00000529912ENST00000534159ENST00000622063
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263671 N/A N/A N/A N/A 12.740±0.00 0.591±0.00 0.445±0.00 N/A N/A 0.995±0.00 1.889±1.23 0.793±0.33 3.144±2.34
ENST00000376324 N/A 0.146±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376332 0.020±0.00 0.299±0.00 N/A N/A 12.081±0.00 1.105±0.00 N/A N/A 0.126±0.00 N/A 2.485±2.07 0.539±0.00 1.362±0.76
ENST00000525413 N/A N/A 0.088±0.00 N/A N/A N/A 0.471±0.00 0.386±0.00 N/A N/A 1.035±0.00 0.336±0.00 2.237±1.38
ENST00000528789 N/A N/A N/A N/A 0.381±0.00 0.556±0.00 N/A 0.104±0.00 N/A N/A 0.574±0.00 0.611±0.26 N/A
ENST00000529912 0.175±0.00 2.372±0.00 N/A 0.221±0.00 N/A 0.445±0.00 0.353±0.01 9.540±9.37 0.107±0.00 N/A N/A N/A N/A
ENST00000534159 N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A
ENST00000622063 N/A N/A 0.159±0.00 0.274±0.00 N/A N/A N/A N/A N/A N/A 1.630±1.17 0.392±0.00 1.968±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SI CIL_0001SI_0002 CGP 11:74493851-74731385

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005737 IEA cytoplasm
GO:0030154 IEA cell differentiation
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078916 chrdl2 chordin-like 2 protein_coding Danio_rerio
ENSMUSG00000030732 Chrdl2 chordin-like 2 protein_coding Mus_musculus

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