C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001SI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076169-ENSDARG00000078916 CGP 7955 21:20695470-20733029
GeneTranscriptPositionBiotype
ENSDARG00000076169 (pold3)
polymerase (DNA-directed), delta 3, accessory subunit 		ENSDART00000101700 (pold3-001) 20695470-20706501 protein_coding
ENSDART00000151306 (pold3-003) 20695570-20696663 retained_intron
ENSDART00000151781 (pold3-004) 20702506-20706301 retained_intron
ENSDARG00000078916 (chrdl2)
chordin-like 2 		ENSDART00000113734 (chrdl2-001) 20723685-20733029 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0001SI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000077514-ENSG00000054938 CGP 9606 11:74493851-74731385
GeneTranscriptPositionBiotype
ENSG00000054938 (CHRDL2)
chordin-like 2 		ENST00000263671 (CHRDL2-001) 74696429-74731175 protein_coding
ENST00000376324 (CHRDL2-007) 74696429-74719303 nonsense_mediated_decay
ENST00000376332 (CHRDL2-002) 74696429-74731385 protein_coding
ENST00000525413 (CHRDL2-009) 74696429-74704635 protein_coding
ENST00000528471 (CHRDL2-006) 74702794-74719303 nonsense_mediated_decay
ENST00000528789 (CHRDL2-003) 74702794-74731182 protein_coding
ENST00000529912 (CHRDL2-010) 74696429-74697694 protein_coding
ENST00000534159 (CHRDL2-004) 74700922-74731153 processed_transcript
ENST00000534276 (CHRDL2-005) 74702794-74719303 nonsense_mediated_decay
ENST00000622063 (CHRDL2-201) 74696509-74731385 protein_coding
ENSG00000077514 (POLD3)
polymerase (DNA-directed), delta 3, accessory subunit 		ENST00000263681 (POLD3-001) 74592530-74643057 protein_coding
ENST00000524752 (POLD3-007) 74625504-74669117 protein_coding
ENST00000527458 (POLD3-002) 74592605-74641114 protein_coding
ENST00000528481 (POLD3-010) 74493851-74618594 protein_coding
ENST00000530163 (POLD3-008) 74628863-74640965 retained_intron
ENST00000530511 (POLD3-005) 74592644-74618770 protein_coding
ENST00000531615 (POLD3-006) 74604563-74618675 protein_coding
ENST00000532497 (POLD3-003) 74592605-74641114 protein_coding
ENST00000532784 (POLD3-004) 74592556-74595502 processed_transcript
ENST00000532954 (POLD3-009) 74638614-74641062 protein_coding
ENSG00000223202 (RN7SKP297)
RNA, 7SK small nuclear pseudogene 297 		ENST00000411270 (RN7SKP297-201) 74685224-74685505 misc_RNA
ENSG00000254500 (RANP3)
RAN, member RAS oncogene family pseudogene 3 		ENST00000530970 (RANP3-001) 74652636-74652911 processed_pseudogene
ENSG00000254837 (AP001372.2)
 ENST00000526036 (AP001372.2-001) 74493366-74498533 lincRNA
ENST00000612462 (AP001372.2-201) 74497188-74498084 lincRNA
ENSG00000279353 (RP11-864N7.4)
 ENST00000624759 (RP11-864N7.4-001) 74698231-74699658 TEC

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001SI_0001ENSDARG00000076169ENSDART00000101700ENSDART00000151306ENSDART00000151781ENSDARG00000078916ENSDART00000113734CIL_0001SI_0002ENSG00000054938ENST00000263671ENST00000376324ENST00000376332ENST00000525413ENST00000528471ENST00000528789ENST00000529912ENST00000534159ENST00000534276ENST00000622063ENSG00000077514ENST00000263681ENST00000524752ENST00000527458ENST00000528481ENST00000530163ENST00000530511ENST00000531615ENST00000532497ENST00000532784ENST00000532954ENSG00000223202ENST00000411270ENSG00000254500ENST00000530970ENSG00000254837ENST00000526036ENST00000612462ENSG00000279353ENST00000624759
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001SI_0001ENSDARG00000076169ENSDART00000101700ENSDART00000151306ENSDART00000151781ENSDARG00000078916ENSDART00000113734CIL_0001SI_0002ENSG00000054938ENST00000263671ENST00000376324ENST00000376332ENST00000525413ENST00000528789ENST00000529912ENST00000534159ENST00000622063ENSG00000077514ENST00000263681ENST00000528481ENST00000530163ENST00000532497ENSG00000223202ENST00000411270ENSG00000254500ENST00000530970ENSG00000254837ENST00000526036ENST00000612462ENSG00000279353ENST00000624759
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000076169 ENSDART00000101700 N/A N/A N/A 2.229±0.00 N/A N/A 1.439±1.43 7.136±2.96 0.531±0.00 N/A 0.798±0.00 N/A N/A N/A
ENSDART00000151306 N/A N/A N/A 3.536±0.00 N/A N/A N/A N/A 0.831±0.00 N/A 0.927±0.00 N/A N/A N/A
ENSDART00000151781 N/A N/A N/A 2.980±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000078916 ENSDART00000113734 N/A N/A N/A 0.313±0.10 N/A N/A 0.552±0.55 0.818±0.37 N/A N/A 0.403±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054938 ENST00000263671 N/A N/A N/A N/A N/A 12.740±0.00 0.591±0.00 0.445±0.00 N/A N/A 0.995±0.00 1.889±1.23 0.793±0.33 3.144±2.34
ENST00000376324 N/A 0.146±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376332 0.020±0.00 0.299±0.00 N/A N/A N/A 12.081±0.00 1.105±0.00 N/A N/A 0.126±0.00 N/A 2.485±2.07 0.539±0.00 1.362±0.76
ENST00000525413 N/A N/A N/A 0.088±0.00 N/A N/A N/A 0.471±0.00 0.386±0.00 N/A N/A 1.035±0.00 0.336±0.00 2.237±1.38
ENST00000528471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528789 N/A N/A N/A N/A N/A 0.381±0.00 0.556±0.00 N/A 0.104±0.00 N/A N/A 0.574±0.00 0.611±0.26 N/A
ENST00000529912 0.175±0.00 2.372±0.00 N/A N/A 0.221±0.00 N/A 0.445±0.00 0.353±0.01 9.540±9.37 0.107±0.00 N/A N/A N/A N/A
ENST00000534159 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A
ENST00000534276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622063 N/A N/A N/A 0.159±0.00 0.274±0.00 N/A N/A N/A N/A N/A N/A 1.630±1.17 0.392±0.00 1.968±0.00
ENSG00000077514 ENST00000263681 3.856±0.00 1.196±0.00 1.220±0.00 1.567±0.15 1.549±0.32 1.221±0.30 1.207±0.00 2.445±0.00 1.313±0.25 2.999±0.63 1.168±1.05 6.255±3.01 3.027±0.61 8.267±1.09
ENST00000524752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528481 N/A N/A N/A N/A N/A N/A N/A 1.695±0.00 N/A N/A N/A N/A N/A N/A
ENST00000530163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.826±0.00 N/A N/A
ENST00000530511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.386±0.00 11.284±0.00
ENST00000532784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223202 ENST00000411270 N/A N/A 0.299±0.00 N/A N/A 1.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254500 ENST00000530970 N/A 0.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254837 ENST00000526036 N/A 0.879±0.00 0.681±0.00 2.316±0.25 1.070±0.00 0.640±0.00 0.727±0.50 1.716±0.00 1.057±0.00 1.422±0.00 0.090±0.00 3.614±0.77 1.765±0.34 3.465±0.00
ENST00000612462 N/A N/A N/A N/A 1.637±0.00 1.509±0.00 N/A 2.640±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000279353 ENST00000624759 N/A 0.012±0.00 N/A 0.057±0.00 0.166±0.14 0.542±0.00 0.069±0.00 0.038±0.00 0.062±0.04 0.023±0.00 N/A 0.253±0.07 N/A 0.119±0.03

Loading