C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIMS binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000060709 RIMBP2 9606 - 12:130396137-130716281 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261655 RIMBP2-001 130396137-130517865 protein_coding
  ENST00000535703 RIMBP2-002 130431647-130517917 protein_coding
  ENST00000536002 RIMBP2-201 130431659-130716281 protein_coding
  ENST00000536632 RIMBP2-005 130399751-130414710 protein_coding
  ENST00000540658 RIMBP2-004 130397310-130407830 nonsense_mediated_decay
  ENST00000544568 RIMBP2-003 130470202-130506770 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261655ENST00000535703ENST00000536632ENST00000540658ENST00000544568
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261655 0.050±0.00 0.049±0.00 0.223±0.00 4.860±0.00 N/A 0.012±0.00 0.311±0.25 0.052±0.04 0.006±0.00 0.033±0.00 0.398±0.22 N/A 0.382±0.00
ENST00000535703 N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A 0.023±0.00 0.023±0.00 N/A N/A N/A
ENST00000536632 N/A N/A N/A N/A 0.316±0.00 N/A N/A N/A N/A N/A 0.457±0.00 0.033±0.00 N/A
ENST00000540658 N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000544568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042U CIL_00042U_0001 CGP 12:130337887-130716281
CIL_00042T CIL_00042T_0001 CGP 12:130396137-130839266

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0010923 IDA negative regulation of phosphatase activity
GO:0030054 IEA cell junction
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001154 rimbp2 RIMS binding protein 2 protein_coding Danio_rerio
ENSDARG00000074614 RIMBP2 (2 of 3) RIMS binding protein 2 protein_coding Danio_rerio
ENSDARG00000088977 RIMBP2 (3 of 3) RIMS binding protein 2 protein_coding Danio_rerio
ENSMUSG00000029420 Rimbp2 RIMS binding protein 2 protein_coding Mus_musculus

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