C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00042U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125207-ENSG00000060709 CGP 9606 12:130337887-130716281
GeneTranscriptPositionBiotype
ENSG00000060709 (RIMBP2)
RIMS binding protein 2 		ENST00000261655 (RIMBP2-001) 130396137-130517865 protein_coding
ENST00000535703 (RIMBP2-002) 130431647-130517917 protein_coding
ENST00000536002 (RIMBP2-201) 130431659-130716281 protein_coding
ENST00000536632 (RIMBP2-005) 130399751-130414710 protein_coding
ENST00000540658 (RIMBP2-004) 130397310-130407830 nonsense_mediated_decay
ENST00000544568 (RIMBP2-003) 130470202-130506770 retained_intron
ENSG00000125207 (PIWIL1)
piwi-like RNA-mediated gene silencing 1 		ENST00000245255 (PIWIL1-001) 130337887-130372637 protein_coding
ENST00000535956 (PIWIL1-005) 130339499-130346405 protein_coding
ENST00000539400 (PIWIL1-003) 130338136-130346420 protein_coding
ENST00000539995 (PIWIL1-004) 130339462-130346504 protein_coding
ENST00000540672 (PIWIL1-007) 130345306-130349298 retained_intron
ENST00000541480 (PIWIL1-008) 130366437-130371383 processed_transcript
ENST00000542723 (PIWIL1-006) 130342231-130346571 protein_coding
ENST00000546060 (PIWIL1-002) 130338108-130346548 protein_coding
ENSG00000256064 (RP11-117L5.4)
 ENST00000539532 (RP11-117L5.4-001) 130419535-130421019 lincRNA
ENSG00000256343 (RP11-662M24.1)
 ENST00000443685 (RP11-662M24.1-001) 130651371-130660651 lincRNA
ENST00000585405 (RP11-662M24.1-002) 130667469-130669233 lincRNA
ENST00000591364 (RP11-662M24.1-003) 130658768-130669122 lincRNA
ENSG00000279146 (RP11-117L5.3)
 ENST00000623766 (RP11-117L5.3-001) 130465008-130466315 TEC
ENSG00000279343 (RP11-200K12.3)
 ENST00000624997 (RP11-200K12.3-001) 130350996-130351707 TEC
ENSG00000279478 (RP11-200K12.2)
 ENST00000623293 (RP11-200K12.2-001) 130383364-130383890 TEC
ENSG00000279905 (RP11-117L5.1)
 ENST00000624734 (RP11-117L5.1-001) 130425004-130430661 TEC
CIL_00042U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029423-ENSMUSG00000029420 CGP 10090 5:128736246-128953362
GeneTranscriptPositionBiotype
ENSMUSG00000029420 (Rimbp2)
RIMS binding protein 2 		ENSMUST00000111346 (Rimbp2-201) 128760401-128953362 protein_coding
ENSMUSG00000029423 (Piwil1)
piwi-like RNA-mediated gene silencing 1 		ENSMUST00000086056 (Piwil1-201) 128736246-128755474 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042U_0001ENSG00000060709ENST00000261655ENST00000535703ENST00000536002ENST00000536632ENST00000540658ENST00000544568ENSG00000125207ENST00000245255ENST00000535956ENST00000539400ENST00000539995ENST00000540672ENST00000541480ENST00000542723ENST00000546060ENSG00000256064ENST00000539532ENSG00000256343ENST00000443685ENST00000585405ENST00000591364ENSG00000279146ENST00000623766ENSG00000279343ENST00000624997ENSG00000279478ENST00000623293ENSG00000279905ENST00000624734CIL_00042U_0002ENSMUSG00000029420ENSMUST00000111346ENSMUSG00000029423ENSMUST00000086056
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042U_0001ENSG00000060709ENST00000261655ENST00000535703ENST00000536632ENST00000540658ENST00000544568ENSG00000125207ENST00000245255ENST00000540672ENSG00000256064ENST00000539532ENSG00000256343ENST00000443685ENSG00000279146ENST00000623766ENSG00000279343ENST00000624997ENSG00000279478ENST00000623293ENSG00000279905ENST00000624734CIL_00042U_0002ENSMUSG00000029420ENSMUST00000111346ENSMUSG00000029423ENSMUST00000086056
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000060709 ENST00000261655 0.050±0.00 0.049±0.00 0.223±0.00 4.860±0.00 N/A N/A 0.012±0.00 0.311±0.25 0.052±0.04 0.006±0.00 0.033±0.00 0.398±0.22 N/A 0.382±0.00
ENST00000535703 N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A 0.023±0.00 0.023±0.00 N/A N/A N/A
ENST00000536002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536632 N/A N/A N/A N/A 0.316±0.00 N/A N/A N/A N/A N/A N/A 0.457±0.00 0.033±0.00 N/A
ENST00000540658 N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000544568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A
ENSG00000125207 ENST00000245255 0.027±0.00 0.053±0.00 N/A 0.022±0.01 0.046±0.00 0.021±0.00 0.028±0.00 0.046±0.00 0.030±0.00 0.015±0.00 N/A 0.012±0.00 N/A 53.653±28.28
ENST00000535956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540672 N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A
ENST00000541480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256064 ENST00000539532 0.035±0.00 N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A 0.237±0.00 N/A 0.582±0.29
ENSG00000256343 ENST00000443685 0.011±0.00 0.055±0.00 N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A 0.273±0.05
ENST00000585405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279146 ENST00000623766 0.089±0.00 N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.08 N/A 0.117±0.00
ENSG00000279343 ENST00000624997 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.362±0.00 N/A N/A N/A 1.229±1.10
ENSG00000279478 ENST00000623293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.07
ENSG00000279905 ENST00000624734 0.072±0.00 0.200±0.00 0.117±0.00 N/A 0.078±0.00 0.039±0.00 0.025±0.00 N/A 0.028±0.00 0.075±0.01 0.016±0.00 0.120±0.00 0.043±0.00 0.436±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029420 ENSMUST00000111346 0.047±0.04 0.626±0.34 0.011±0.00 7.640±6.30 0.018±0.00 N/A 0.033±0.01 0.060±0.02 0.008±0.00 0.031±0.02 0.013±0.00 0.126±0.05 0.015±0.01 N/A
ENSMUSG00000029423 ENSMUST00000086056 N/A 0.034±0.02 0.002±0.00 0.051±0.02 0.016±0.01 N/A 0.035±0.02 0.037±0.03 0.009±0.00 N/A 0.013±0.00 0.109±0.08 0.003±0.00 98.848±45.96

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