C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acetyl-CoA acyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000060971 ACAA1 9606 - 3:38103129-38137242 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301810 ACAA1-002 38122710-38137242 protein_coding
  ENST00000333167 ACAA1-001 38122710-38137208 protein_coding
  ENST00000411549 ACAA1-003 38122710-38137242 nonsense_mediated_decay
  ENST00000418880 ACAA1-017 38127631-38137092 nonsense_mediated_decay
  ENST00000421218 ACAA1-014 38125564-38136624 protein_coding
  ENST00000423611 ACAA1-009 38126451-38137137 nonsense_mediated_decay
  ENST00000440176 ACAA1-004 38126061-38137096 nonsense_mediated_decay
  ENST00000447223 ACAA1-013 38126493-38137072 nonsense_mediated_decay
  ENST00000450296 ACAA1-007 38122719-38137125 protein_coding
  ENST00000451419 ACAA1-008 38103129-38123083 processed_transcript
  ENST00000452171 ACAA1-019 38122833-38131946 protein_coding
  ENST00000460424 ACAA1-010 38133873-38137127 retained_intron
  ENST00000465181 ACAA1-015 38129329-38134467 retained_intron
  ENST00000469559 ACAA1-006 38122716-38132552 retained_intron
  ENST00000469600 ACAA1-020 38122910-38126342 retained_intron
  ENST00000480865 ACAA1-005 38122719-38133582 processed_transcript
  ENST00000484284 ACAA1-011 38133780-38137120 retained_intron
  ENST00000489559 ACAA1-012 38134396-38137081 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333167ENST00000411549ENST00000450296ENST00000452171ENST00000469559ENST00000469600ENST00000480865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333167 15.931±0.00 15.259±0.00 10.891±0.00 8.997±6.58 25.870±0.00 6.940±0.00 29.806±0.00 30.853±4.63 55.723±53.53 25.323±0.00 8.107±0.00 16.249±6.40 19.710±3.77 16.961±2.36
ENST00000411549 N/A N/A N/A N/A N/A 1.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450296 N/A N/A N/A 10.365±0.00 7.632±0.00 3.036±0.00 N/A 28.880±0.00 64.962±0.00 N/A 1.370±0.00 0.394±0.00 N/A N/A
ENST00000452171 5.713±0.00 11.909±0.00 N/A 7.960±5.33 6.362±4.39 1.997±0.00 11.951±0.00 23.213±1.61 43.937±0.00 2.883±0.00 3.178±0.00 24.097±0.00 13.538±0.00 20.389±0.00
ENST00000469559 N/A N/A N/A N/A N/A N/A N/A N/A 0.229±0.00 N/A 0.276±0.00 N/A N/A N/A
ENST00000469600 N/A N/A N/A N/A 2.820±0.00 2.470±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480865 N/A 5.182±0.00 3.503±0.00 0.894±0.00 1.776±0.00 N/A N/A N/A N/A N/A N/A 3.989±3.65 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VD CIL_0005VD_0001 CGP 3:38007496-38124025
CIL_0005W9 CIL_0005W9_0001 CGP 3:38039205-38137242

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000038 IMP very long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0003988 IEA acetyl-CoA C-acyltransferase activity
GO:0005515 IPI protein binding
GO:0005777 IDA peroxisome
GO:0005782 TAS peroxisomal matrix
GO:0006635 IMP fatty acid beta-oxidation
GO:0008152 IEA metabolic process
GO:0008206 IMP bile acid metabolic process
GO:0008610 IEA lipid biosynthetic process
GO:0016020 IDA membrane
GO:0016401 IMP palmitoyl-CoA oxidase activity
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0033540 TAS fatty acid beta-oxidation using acyl-CoA oxidase
GO:0033559 TAS unsaturated fatty acid metabolic process
GO:0036109 TAS alpha-linolenic acid metabolic process
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004687 acaa1 acetyl-Coenzyme A acyltransferase 1 protein_coding Danio_rerio
ENSMUSG00000010651 Acaa1b acetyl-Coenzyme A acyltransferase 1B protein_coding Mus_musculus
ENSMUSG00000036138 Acaa1a acetyl-Coenzyme A acyltransferase 1A protein_coding Mus_musculus

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