C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acetyl-CoA acyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333167 ACAA1-001 ENSG00000060971 9606 - 3:38122710-38137208 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333167
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333167 15.931±0.00 15.259±0.00 10.891±0.00 8.997±6.58 25.870±0.00 6.940±0.00 29.806±0.00 30.853±4.63 55.723±53.53 25.323±0.00 8.107±0.00 16.249±6.40 19.710±3.77 16.961±2.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VD CIL_0005VD_0001 CGP 3:38007496-38124025
CIL_0005W9 CIL_0005W9_0001 CGP 3:38039205-38137242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000038 IMP very long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0003988 IEA acetyl-CoA C-acyltransferase activity
GO:0005515 IPI protein binding
GO:0005777 IDA peroxisome
GO:0005782 TAS peroxisomal matrix
GO:0006635 IMP fatty acid beta-oxidation
GO:0008152 IEA metabolic process
GO:0008206 IMP bile acid metabolic process
GO:0008610 IEA lipid biosynthetic process
GO:0016020 IDA membrane
GO:0016401 IMP palmitoyl-CoA oxidase activity
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0033540 TAS fatty acid beta-oxidation using acyl-CoA oxidase
GO:0033559 TAS unsaturated fatty acid metabolic process
GO:0036109 TAS alpha-linolenic acid metabolic process
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000010795 Acaa1b-001 protein_coding Mus_musculus 0 1365
ENSMUST00000039784 Acaa1a-001 protein_coding Mus_musculus 0 1338
ENSMUST00000175743 Acaa1a-003 protein_coding Mus_musculus 0 1029
ENSMUST00000176546 Acaa1a-007 nonsense_mediated_decay Mus_musculus 0 865
ENSMUST00000177463 Acaa1a-006 protein_coding Mus_musculus 0 586
ENSMUST00000176796 Acaa1a-002 retained_intron Mus_musculus 0 411
ENSMUST00000176397 Acaa1a-004 protein_coding Mus_musculus 0 405
ENSMUST00000176007 Acaa1a-008 retained_intron Mus_musculus 0 387
ENSMUST00000175859 Acaa1a-010 retained_intron Mus_musculus 9e-16 90

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