C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: amyloid beta precursor protein (cytoplasmic tail) binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000062725 APPBP2 9606 - 17:60443149-60526219 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000083182 APPBP2-001 60443149-60526219 protein_coding
  ENST00000585368 APPBP2-003 60494474-60526123 protein_coding
  ENST00000588668 APPBP2-004 60479162-60525938 nonsense_mediated_decay
  ENST00000589341 APPBP2-002 60447746-60526132 nonsense_mediated_decay
  ENST00000590244 APPBP2-005 60466351-60526098 processed_transcript
  ENST00000592995 APPBP2-006 60459507-60465161 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000083182ENST00000589341
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000083182 2.679±0.00 1.004±0.00 N/A 4.536±0.00 2.688±1.40 1.875±0.78 1.710±1.02 4.496±0.00 3.286±2.80 2.416±1.38 0.278±0.00 4.028±2.17 2.016±1.21 5.223±0.00
ENST00000589341 N/A N/A 1.994±0.00 N/A 2.551±0.00 2.632±0.00 0.783±0.00 N/A N/A 2.456±0.63 1.488±0.00 3.282±0.94 5.432±0.00 25.504±12.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000701 CIL_000701_0001 CGP 17:60392429-60526219
CIL_000704 CIL_000704_0001 CGP 17:60443149-60666280

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003777 TAS microtubule motor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 NAS nucleus
GO:0005737 NAS cytoplasm
GO:0005874 IEA microtubule
GO:0005875 TAS microtubule associated complex
GO:0006886 TAS intracellular protein transport
GO:0008152 TAS metabolic process
GO:0030659 IDA cytoplasmic vesicle membrane
GO:0046907 IDA intracellular transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007566 appbp2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 protein_coding Danio_rerio
ENSMUSG00000018481 Appbp2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 protein_coding Mus_musculus

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